RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 ADGRG4Q8IZF6 3080 aa10.71□□□□□ -0.7
BRCA1-209ENST00000470026 HINT1P49773 126 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-209ENST00000470026 MFAP4P55083 255 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 ARF6P62330 175 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 ZNF562Q6V9R5 426 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 BCL6BQ8N143 479 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-209ENST00000470026 IGFBPL1Q8WX77 278 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 TMUB1Q9BVT8 246 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 HSPB8Q9UJY1 196 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 HILPDAQ9Y5L2 63 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 M0R3E3 92 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 GNG7O60262 68 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 LINC01545Q5VT33 79 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 Q8N6K4 173 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 MAP1LC3CQ9BXW4 147 aa10.7□□□□□ -0.7
BRCA1-209ENST00000470026 FAM90A27PA6NNH2 459 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 ZNF138P52744 262 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 EBI3Q14213 229 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 KLF17Q5JT82 389 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-209ENST00000470026 COX11Q9Y6N1 276 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 U3KQK5 164 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 RIF1Q5UIP0 2472 aaKnown RBP10.69□□□□□ -0.7
BRCA1-209ENST00000470026 ATMQ13315 3056 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 KLRD1Q13241 179 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 C11orf71Q6IPW1 123 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 C1orf122Q6ZSJ8 110 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 C8orf49Q96NF6 230 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 MS4A6AQ9H2W1 248 aa10.69□□□□□ -0.7
BRCA1-209ENST00000470026 LOC105371242A0A075B767 164 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 OOSP1A8MZH6 123 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 NDPQ00604 133 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 PSG9Q00887 426 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 ARPC1AQ92747 370 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 TIMD4Q96H15 378 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 ASCL2Q99929 193 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 AAMDCQ9H7C9 122 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 SCRT2Q9NQ03 307 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 AP5S1Q9NUS5 200 aa10.68□□□□□ -0.7
BRCA1-209ENST00000470026 hDV102S1A0JD36 115 aa10.67□□□□□ -0.7
BRCA1-209ENST00000470026 FBLL1A6NHQ2 334 aaKnown RBP10.67□□□□□ -0.7
BRCA1-209ENST00000470026 UNQ5815/PRO19632Q6UWF5 114 aa10.67□□□□□ -0.7
BRCA1-209ENST00000470026 ZNF747Q9BV97 191 aa10.67□□□□□ -0.7
BRCA1-209ENST00000470026 C21orf62Q9NYP8 219 aa10.67□□□□□ -0.7
BRCA1-209ENST00000470026 LY6HO94772 140 aa10.67□□□□□ -0.7
BRCA1-209ENST00000470026 CT45A10P0DMU9 189 aa10.67□□□□□ -0.7
BRCA1-209ENST00000470026 S4R3C0 116 aa10.67□□□□□ -0.7
BRCA1-209ENST00000470026 RPL7P18124 248 aaKnown RBP10.66□□□□□ -0.7
BRCA1-209ENST00000470026 KLK9Q2XQG4 91 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 CCDC144NLQ6NUI1 221 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 ZNF738Q8NE65 137 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 KLK9Q9UKQ9 250 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 GVINP1Q7Z2Y8 2422 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 SH2D1AO60880 128 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 EGR2P11161 476 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-209ENST00000470026 CSN1S1P47710 185 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 SLC25A34Q6PIV7 304 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 DYNAPQ8N1N2 210 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 PSMG3-AS1Q96PY0 264 aa10.66□□□□□ -0.7
BRCA1-209ENST00000470026 ZZEF1O43149 2961 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 A0A096LNJ9 63 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 HSBP1L1C9JCN9 74 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 CCL25O15444 150 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 CSN3P07498 182 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 FOXC1Q12948 553 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 CDSNQ15517 529 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 SAPCD1Q5SSQ6 148 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 MINOS1Q5TGZ0 78 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 FAM104BQ5XKR9 115 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 LYZL1Q6UWQ5 148 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 VMO1Q7Z5L0 202 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 OR10AG1Q8NH19 301 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 PRR25Q96S07 402 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 THYN1Q9P016 225 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 TP73-AS1Q9UF72 201 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 MINOS1-NBL1R4GNA1 71 aa10.65□□□□□ -0.7
BRCA1-209ENST00000470026 TMEM189A5PLL7 270 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 CCL21O00585 134 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 TCF21O43680 179 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 ADORA2A-AS1P86434 159 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 SRSF2Q01130 221 aaKnown RBP10.64□□□□□ -0.71
BRCA1-209ENST00000470026 UBE2V1Q13404 147 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 HES1Q14469 280 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 FA2HQ7L5A8 372 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 ARHGAP32A7KAX9 2087 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 KALRNO60229 2985 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 IGHG4P01861 327 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 CTSGP08311 255 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 ZNF575Q86XF7 245 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 SMAD5-AS1Q9Y6J3 95 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 DMXL2Q8TDJ6 3036 aa10.64□□□□□ -0.71
BRCA1-209ENST00000470026 ZFHX2Q9C0A1 2572 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-209ENST00000470026 PAX8Q06710 450 aa10.63□□□□□ -0.71
BRCA1-209ENST00000470026 MPV17L2Q567V2 206 aa10.63□□□□□ -0.71
BRCA1-209ENST00000470026 BVES-AS1Q5T3Y7 98 aa10.63□□□□□ -0.71
BRCA1-209ENST00000470026 Q6ZVH6 145 aa10.63□□□□□ -0.71
BRCA1-209ENST00000470026 PRSS3P2Q8NHM4 247 aa10.63□□□□□ -0.71
BRCA1-209ENST00000470026 DPF1Q92782 380 aa10.63□□□□□ -0.71
BRCA1-209ENST00000470026 IGKV2-40A0A087WW87 121 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-209ENST00000470026 IGHV7-81A0A0B4J1V7 117 aa10.63□□□□□ -0.71
BRCA1-209ENST00000470026 TMEM213A2RRL7 107 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 249.1 ms