RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 PSMB3P49720 205 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 BCAP31P51572 246 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 TAS2R30P59541 319 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 VAMP2P63027 116 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 DLK1P80370 383 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 FAM222AQ5U5X8 452 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 SPATA31B1PQ5VZV4 182 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 OR10P1Q8NGE3 313 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 TMEM147Q9BVK8 224 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 MFFQ9GZY8 342 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 NPVFQ9HCQ7 196 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 SEPSECSQ9HD40 501 aaKnown RBP6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 DKK2Q9UBU2 259 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 HIGD1AQ9Y241 93 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 PCLOQ9Y6V0 5065 aa6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 APOBP04114 4563 aaKnown RBP6.54□□□□□ -1.36
SHROOM3-203ENST00000469923 PLAC8L1A1L4L8 177 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 GOSR2O14653 212 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 TSC22D2O75157 780 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 CXCL3P19876 107 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 ID1P41134 155 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 PLP1P60201 277 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 S100A10P60903 97 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 NHLH2Q02577 135 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 OPCMLQ14982 345 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 PSG3Q16557 428 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 MARVELD1Q9BSK0 173 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 ARV1Q9H2C2 271 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 HRH4Q9H3N8 390 aa6.53□□□□□ -1.36
SHROOM3-203ENST00000469923 TRAV10A0A0B4J240 114 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 J3KRW8 73 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 HTN1P15515 57 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 GALR1P47211 349 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 CAV2P51636 162 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 ERCC8Q13216 396 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 EBLN2Q6P2I7 272 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 LINC00305Q7Z4B0 112 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 TMEM252Q8N6L7 170 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 ZNF738Q8NE65 137 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 GPN1Q9HCN4 374 aaPredicted RBP6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 ZNF586Q9NXT0 402 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 OR5AC2Q9NZP5 309 aa6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 YTHDF2Q9Y5A9 579 aaKnown RBP6.52□□□□□ -1.37
SHROOM3-203ENST00000469923 IGLV2-18A0A075B6J9 118 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 FABP1P07148 127 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 CT45A10P0DMU9 189 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 HIST1H1AQ02539 215 aaPredicted RBP6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 LRRC37A5PQ49AS3 106 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 TEPPQ6URK8 271 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 OR8A1Q8NGG7 326 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 RPUSD4Q96CM3 377 aaKnown RBP6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 SAT2Q96F10 170 aaPredicted RBP6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 NEU1Q99519 415 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 RNF126Q9BV68 326 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 RPRMQ9NS64 109 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 MGAT4CQ9UBM8 478 aa6.51□□□□□ -1.37
SHROOM3-203ENST00000469923 M0R3E3 92 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 RTL8CO15255 209 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 PRAF2O60831 178 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 NDUFB4O95168 129 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 CFDP00746 253 aaPredicted RBP6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 SPART-AS1P0CW21 52 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 PYYP10082 97 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 H2BFSP57053 126 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 RHOBP62745 196 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 TMEM88Q6PEY1 159 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 IGF2BP2-AS1Q96M15 143 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 DNAJC4Q9NNZ3 241 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 LYRM2Q9NU23 88 aaPredicted RBP6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 WDR83OSQ9Y284 106 aa6.5□□□□□ -1.37
SHROOM3-203ENST00000469923 A0A087X0K7 114 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 FNDC10F2Z333 226 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 SSNA1O43805 119 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 IGLC2P0DOY2 106 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 DEFB130BP0DP73 79 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 DEFB130AP0DP74 79 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 PVALBP20472 110 aaPredicted RBP6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 CAMLGP49069 296 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 SULT1A1P50225 295 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 RAP2BP61225 183 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 TMEM41BQ5BJD5 291 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 THAP6Q8TBB0 222 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 LINC01587Q99440 93 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 NIPSNAP3BQ9BS92 247 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 GGACTQ9BVM4 153 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 NMES1Q9C002 83 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 WFDC1Q9HC57 220 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 ZNF331Q9NQX6 463 aaPredicted RBP6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 PFDN2Q9UHV9 154 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 ALG5Q9Y673 324 aa6.49□□□□□ -1.37
SHROOM3-203ENST00000469923 UBE2L5PA0A1B0GUS4 154 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 C11orf94C9JXX5 98 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 COX7A2P2O60397 106 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 RLN2P04090 185 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 RPL7P18124 248 aaKnown RBP6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 S100A11P31949 105 aa6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 NUTF2P61970 127 aaKnown RBP6.48□□□□□ -1.37
SHROOM3-203ENST00000469923 SELENOTP62341 195 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms