RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 MED12LQ86YW9 2145 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 EML5Q05BV3 1969 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 SPHKAPQ2M3C7 1700 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 KDM6AO15550 1401 aaPredicted RBP2.03□□□□□ -2.08
XRN1-207ENST00000468894 DSPPQ9NZW4 1301 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 IGLV10-54A0A075B6I4 117 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 IGHV1-45A0A0A0MS14 117 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 TRBV7-6A0A0J9YX20 115 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 PNMA8CA0A1B0GUJ8 204 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 IRGMA1A4Y4 181 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 ZNF860A6NHJ4 632 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 BBIP1A8MTZ0 92 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 UBE2L6O14933 153 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 PLA2G10O15496 165 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 LTAP01374 205 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 IL7P13232 177 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 HIST1H1DP16402 221 aaKnown RBP2.03□□□□□ -2.08
XRN1-207ENST00000468894 CRYBB3P26998 211 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 SDC2P34741 201 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 RPL22P35268 128 aaKnown RBP2.03□□□□□ -2.08
XRN1-207ENST00000468894 ZNF93P35789 620 aaPredicted RBP2.03□□□□□ -2.08
XRN1-207ENST00000468894 GUCA1AP43080 201 aaPredicted RBP2.03□□□□□ -2.08
XRN1-207ENST00000468894 NUDT2P50583 147 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 AKR1C2P52895 323 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 TMBIM6P55061 237 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 UBA52P62987 128 aaKnown RBP2.03□□□□□ -2.08
XRN1-207ENST00000468894 MYL5Q02045 173 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 HES1Q14469 280 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 RRN3P1Q2M238 152 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 LAIR2Q6ISS4 152 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 LINC00305Q7Z4B0 112 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 RPS19BP1Q86WX3 136 aaKnown RBP2.03□□□□□ -2.08
XRN1-207ENST00000468894 GPHB5Q86YW7 130 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 MSRB3Q8IXL7 192 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 LINC00311Q8N616 119 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 OR8D4Q8NGM9 314 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 OR4K13Q8NH42 304 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 CMTM2Q8TAZ6 248 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 H1FXQ92522 213 aaKnown RBP2.03□□□□□ -2.08
XRN1-207ENST00000468894 MAL2Q969L2 176 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 CIB3Q96Q77 187 aaPredicted RBP2.03□□□□□ -2.08
XRN1-207ENST00000468894 TMEM191AQ9H0A3 160 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 BANF2Q9H503 90 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 RERGLQ9H628 205 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 TUBA4BQ9H853 241 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 TAS2R8Q9NYW2 309 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 IER3IP1Q9Y5U9 82 aa2.03□□□□□ -2.08
XRN1-207ENST00000468894 NYNRINQ9P2P1 1898 aaKnown RBP2.03□□□□□ -2.09
XRN1-207ENST00000468894 PATJQ8NI35 1801 aa2.03□□□□□ -2.09
XRN1-207ENST00000468894 MON2Q7Z3U7 1717 aa2.03□□□□□ -2.09
XRN1-207ENST00000468894 PPRC1Q5VV67 1664 aaKnown RBP2.02□□□□□ -2.09
XRN1-207ENST00000468894 FANCAO15360 1455 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 NINQ8N4C6 2090 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 TRAV27A0A087WT01 109 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 IGHV1-58A0A0C4DH39 117 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 IGKV1-12A0A0C4DH73 117 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 A0A0D9SEW6 157 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 A0A1W2PRS3 328 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 IGLL5B9A064 214 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 E7EQL1 145 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 C3orf84H3BNL1 204 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 BUB1B-PAK6H3BSN5 160 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 C19orf84I3L1E1 186 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 TMEM256-PLSCR3K7ERE1 68 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 KLF7O75840 302 aaPredicted RBP2.02□□□□□ -2.09
XRN1-207ENST00000468894 CPSF4O95639 269 aaKnown RBP2.02□□□□□ -2.09
XRN1-207ENST00000468894 NAPSAO96009 420 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 IGKV1D-12P01611 117 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 TCRAP04437 139 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 CD7P09564 240 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 IGLC1P0CG04 106 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 FABP2P12104 132 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 ZNF720Q7Z2F6 126 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 TTC9CQ8N5M4 171 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 FAM57AQ8TBR7 257 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 MIEN1Q9BRT3 115 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 MRPL32Q9BYC8 188 aaKnown RBP2.02□□□□□ -2.09
XRN1-207ENST00000468894 FAM60AQ9NP50 221 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 RPRMQ9NS64 109 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 CCDC167Q9P0B6 97 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 MPC1Q9Y5U8 109 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 TMEM131LA2VDJ0 1609 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 GLI3P10071 1580 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 CEP350Q5VT06 3117 aa2.02□□□□□ -2.09
XRN1-207ENST00000468894 POLA1P09884 1462 aaPredicted RBP2.01□□□□□ -2.09
XRN1-207ENST00000468894 RGS12O14924 1447 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 IGHV3OR15-7A0A075B7D8 119 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 IGKV1-9A0A0C4DH69 117 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 SDHAF1A6NFY7 115 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 K7ERJ3 54 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 PITX3O75364 302 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 SLC25A5P05141 298 aaKnown RBP2.01□□□□□ -2.09
XRN1-207ENST00000468894 SRP19P09132 144 aaKnown RBP2.01□□□□□ -2.09
XRN1-207ENST00000468894 SEC11BP0C7V7 166 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 ZNF705DP0CH99 300 aaPredicted RBP2.01□□□□□ -2.09
XRN1-207ENST00000468894 CRYGSP22914 178 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 ARPP19P56211 112 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 DCDP81605 110 aaKnown RBP2.01□□□□□ -2.09
XRN1-207ENST00000468894 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
XRN1-207ENST00000468894 SPANXN3Q5MJ09 141 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms