RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 TMEM200BQ69YZ2 307 aa8.58□□□□□ -1.04
TRAPPC10-207ENST00000468864 LINC00527Q9UJ94 153 aa8.58□□□□□ -1.04
TRAPPC10-207ENST00000468864 SMAD7O15105 426 aaKnown RBP8.58□□□□□ -1.04
TRAPPC10-207ENST00000468864 TICRRQ7Z2Z1 1910 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 H0YJW9 148 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 CKS1BP61024 79 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 TMEM158Q8WZ71 300 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 TMEM14BQ9NUH8 114 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 A0A1W2PPI3 338 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 PSMB11A5LHX3 300 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 PRTN3P24158 256 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 ADIPOQQ15848 244 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 LTBP2Q14767 1821 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 IGHV3-11P01762 117 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 FAM159AQ6UWV7 190 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 AMTNQ6UX39 209 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 TMEM167AQ8TBQ9 72 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 ANAPC13Q9BS18 74 aa8.57□□□□□ -1.04
TRAPPC10-207ENST00000468864 SRRM4A7MD48 611 aaKnown RBP8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 TMPRSS3P57727 454 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 ARPC1AQ92747 370 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 C11orf52Q96A22 123 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 TSSC4Q9Y5U2 329 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 A0A0U1RRA0 63 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 TOMM40O96008 361 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 IGHV4-39P01824 125 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 Q6ZPA2 131 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 CENPVQ7Z7K6 275 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 CUL9Q8IWT3 2517 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 IGHV3OR16-12A0A075B7B8 117 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 SMIM27A0A1W2PRY6 76 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 SH2D1AO60880 128 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 PPBPP02775 128 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 SRSF6Q13247 344 aaKnown RBP8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 C1orf122Q6ZSJ8 110 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 Q86TA4 180 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 CHAC1Q9BUX1 264 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
TRAPPC10-207ENST00000468864 SETD2Q9BYW2 2564 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 TRAV40A0A0B4J280 105 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 ODF3L1Q8IXM7 274 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 IGKV3OR2-268A0A0C4DH90 116 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 K7ERJ3 54 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 NBR2O15453 112 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 WT1-ASQ06250 92 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 TEX29Q8N6K0 151 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 TRAV2A0A0B4J234 112 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 IGKV3D-20A0A0C4DH25 116 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 RNASE4P34096 147 aaKnown RBP8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 ASIPP42127 132 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 PRR20EP86478 221 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 PRR20CP86479 221 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 PRR20DP86480 221 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 PRR20BP86481 221 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 PRR20AP86496 221 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 SRSF1Q07955 248 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 MORN5Q5VZ52 161 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 SLC25A2Q9BXI2 301 aa8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 COLQQ9Y215 455 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC10-207ENST00000468864 KLRB1Q12918 225 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 PVRIGQ6DKI7 326 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 LYPD2Q6UXB3 125 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 TRGV9Q99603 122 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 TRAV12-3A0A0B4J271 114 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 IGHV2-70DA0A0C4DH43 119 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 TPSG1Q9NRR2 321 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 PGPEP1Q9NXJ5 209 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 TRGV3P03979 118 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 COX8AP10176 69 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 SRD5A1P18405 259 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 CNTFRP26992 372 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 ATP5G2Q06055 141 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 TMEM95Q3KNT9 176 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 GAFA1Q96PS6 74 aa8.54□□□□□ -1.04
TRAPPC10-207ENST00000468864 K7EMI3 77 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 DIAPH2-AS1Q14236 149 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 MRAP2Q96G30 205 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 GEMIN7Q9H840 131 aaKnown RBP8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 SLC25A15Q9Y619 301 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 A8MWV9 139 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 C15orf65H3BRN8 121 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 LY6HO94772 140 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 TSPAN13O95857 204 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 C11orf1Q9H5F2 150 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 NAV3Q8IVL0 2385 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 TANC2Q9HCD6 1990 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 H3BMG7 143 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 RNASE1P07998 156 aaKnown RBP8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 ID1P41134 155 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 PCP2Q8IVA1 136 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 SIGLEC9Q9Y336 463 aa8.53□□□□□ -1.04
TRAPPC10-207ENST00000468864 TLN1Q9Y490 2541 aaKnown RBP8.52□□□□□ -1.04
TRAPPC10-207ENST00000468864 IGHV1-8P0DP01 117 aa8.52□□□□□ -1.04
TRAPPC10-207ENST00000468864 APOBEC3AP31941 199 aaPredicted RBP8.52□□□□□ -1.04
TRAPPC10-207ENST00000468864 RHOGP84095 191 aa8.52□□□□□ -1.04
TRAPPC10-207ENST00000468864 PSMG4Q5JS54 123 aa8.52□□□□□ -1.04
TRAPPC10-207ENST00000468864 MEIG1Q5JSS6 88 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms