RNA–Protein interactions for RNA: ENST00000468570.1

SGIP1-208, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 324 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-208ENST00000468570 Q6ZSA8 131 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 CROCCP2Q86T23 111 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 PDZD9Q8IXQ8 264 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 STX19Q8N4C7 294 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 NUP35Q8NFH5 326 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 TMEM254Q8TBM7 123 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 THEM6Q8WUY1 208 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 TCEAL4Q96EI5 215 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 ADAT3Q96EY9 351 aaPredicted RBP0.71□□□□□ -2.3
SGIP1-208ENST00000468570 TEX37Q96LM6 180 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 CCDC115Q96NT0 180 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 GPER1Q99527 375 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 SLC25A21Q9BQT8 299 aaPredicted RBP0.71□□□□□ -2.3
SGIP1-208ENST00000468570 C2orf88Q9BSF0 95 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 OR2J1Q9GZK6 312 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 MAP1LC3BQ9GZQ8 125 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 PBOV1Q9GZY1 135 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 HSPB11Q9Y547 144 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 ASB4Q9Y574 426 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 BCL9O00512 1426 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 PTPRGP23470 1445 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 ARHGAP31Q2M1Z3 1444 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 MYOM3Q5VTT5 1437 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 PRG4Q92954 1404 aaPredicted RBP0.71□□□□□ -2.3
SGIP1-208ENST00000468570 CNTLNQ9NXG0 1405 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 FANCMQ8IYD8 2048 aa0.71□□□□□ -2.3
SGIP1-208ENST00000468570 MED23Q9ULK4 1368 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 ARFGEF3Q5TH69 2177 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 BCORL1Q5H9F3 1711 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 ANKRD26Q9UPS8 1709 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 PLXNA4Q9HCM2 1894 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 TCOF1Q13428 1488 aaKnown RBP0.7□□□□□ -2.3
SGIP1-208ENST00000468570 MBD5Q9P267 1494 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 TRAV36DV7A0A075B6V5 113 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 A0A096LPI6 279 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 TRAV3A0A0B4J244 114 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 RIIAD1A6NNX1 92 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 GEMIN2O14893 280 aaKnown RBP0.7□□□□□ -2.3
SGIP1-208ENST00000468570 GADD45GO95257 159 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 OR10J4P0C629 311 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 RNASE3P12724 160 aaKnown RBP0.7□□□□□ -2.3
SGIP1-208ENST00000468570 KDELR1P24390 212 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 S100GP29377 79 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 RNASE4P34096 147 aaKnown RBP0.7□□□□□ -2.3
SGIP1-208ENST00000468570 DYNLT3P51808 116 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 GTF2A1P52655 376 aaPredicted RBP0.7□□□□□ -2.3
SGIP1-208ENST00000468570 PSG9Q00887 426 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 OR8B8Q15620 311 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 SAMD13Q5VXD3 122 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 EIF5AL1Q6IS14 154 aaKnown RBP0.7□□□□□ -2.3
SGIP1-208ENST00000468570 C2orf82Q6UX34 121 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 PRR15Q8IV56 129 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 C3orf56Q8N813 242 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 GRPEL2Q8TAA5 225 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 RETNLBQ9BQ08 111 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 AIF1LQ9BQI0 150 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 EFCAB11Q9BUY7 163 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 RTL8AQ9BWD3 113 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 TMEM126AQ9H061 195 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 LAMTOR3Q9UHA4 124 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 LY96Q9Y6Y9 160 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 ADGRB1O14514 1584 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 KDM5CP41229 1560 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 MYH6P13533 1939 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 CCNB3Q8WWL7 1395 aa0.7□□□□□ -2.3
SGIP1-208ENST00000468570 MYO5AQ9Y4I1 1855 aaKnown RBP0.69□□□□□ -2.3
SGIP1-208ENST00000468570 CCDC171Q6TFL3 1326 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 USP54Q70EL1 1684 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 UHRF1BP1LA0JNW5 1464 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 TNRC6AQ8NDV7 1962 aaKnown RBP0.69□□□□□ -2.3
SGIP1-208ENST00000468570 TRBV6-7A0A0A0MS04 114 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 TRBV6-8A0A0A6YYG3 113 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 A0A1B0GW64 132 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 TRDV1A0A1B0GX56 115 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 C9orf170A2RU37 121 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 E7EQ34 232 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 C17orf112F2Z3M2 114 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 J3KT08 172 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 TMEM256-PLSCR3K7ERE1 68 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 M0R378 163 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 DEGS1O15121 323 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 DLEU1O43261 78 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 LYZL6O75951 148 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 IGF2P01344 180 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 IFNA4P05014 189 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 SCTP09683 121 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 MPC1LP0DKB6 136 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 LYNX1P0DP58 116 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 HLA-EP13747 358 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 OGNP20774 298 aaKnown RBP0.69□□□□□ -2.3
SGIP1-208ENST00000468570 S100A1P23297 94 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 NFYBP25208 207 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 INSL3P51460 131 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 CKS1BP61024 79 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 PLCXD2Q0VAA5 305 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 FAM74A1Q5RGS3 127 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 HRCT1Q6UXD1 115 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 C4orf22Q6V702 233 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 OR9Q1Q8NGQ5 310 aa0.69□□□□□ -2.3
SGIP1-208ENST00000468570 OR2T35Q8NGX2 323 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms