RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CXCL1P09341 107 aa7.87□□□□□ -1.15
MSH5-213ENST00000468136 MGST1P10620 155 aaKnown RBP7.87□□□□□ -1.15
MSH5-213ENST00000468136 WDR73Q6P4I2 378 aa7.87□□□□□ -1.15
MSH5-213ENST00000468136 COX8CQ7Z4L0 72 aa7.87□□□□□ -1.15
MSH5-213ENST00000468136 GPHB5Q86YW7 130 aa7.87□□□□□ -1.15
MSH5-213ENST00000468136 WFDC11Q8NEX6 87 aa7.87□□□□□ -1.15
MSH5-213ENST00000468136 OR4X2Q8NGF9 303 aa7.87□□□□□ -1.15
MSH5-213ENST00000468136 DAZAP1Q96EP5 407 aaKnown RBP7.87□□□□□ -1.15
MSH5-213ENST00000468136 PEF1Q9UBV8 284 aaKnown RBP7.87□□□□□ -1.15
MSH5-213ENST00000468136 SOX21Q9Y651 276 aaPredicted RBP7.87□□□□□ -1.15
MSH5-213ENST00000468136 V9GYV3 84 aa7.87□□□□□ -1.15
MSH5-213ENST00000468136 A0A1W2PPQ1 181 aa7.86□□□□□ -1.15
MSH5-213ENST00000468136 CLPSL1A2RUU4 121 aa7.86□□□□□ -1.15
MSH5-213ENST00000468136 HOXA3O43365 443 aaPredicted RBP7.86□□□□□ -1.15
MSH5-213ENST00000468136 PSG3Q16557 428 aa7.86□□□□□ -1.15
MSH5-213ENST00000468136 C16orf54Q6UWD8 224 aa7.86□□□□□ -1.15
MSH5-213ENST00000468136 Q86TA4 180 aa7.86□□□□□ -1.15
MSH5-213ENST00000468136 NOL4LQ96MY1 436 aaPredicted RBP7.86□□□□□ -1.15
MSH5-213ENST00000468136 GFRA4Q9GZZ7 299 aa7.86□□□□□ -1.15
MSH5-213ENST00000468136 ZNF702PQ9H963 129 aa7.86□□□□□ -1.15
MSH5-213ENST00000468136 ZNF331Q9NQX6 463 aaPredicted RBP7.86□□□□□ -1.15
MSH5-213ENST00000468136 UFC1Q9Y3C8 167 aa7.86□□□□□ -1.15
MSH5-213ENST00000468136 DCHS2Q6V1P9 2916 aa7.86□□□□□ -1.15
MSH5-213ENST00000468136 SMIM27A0A1W2PRY6 76 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 ZNF320A2RRD8 509 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 PGPEP1LA6NFU8 196 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 ZNF705GA8MUZ8 300 aaPredicted RBP7.85□□□□□ -1.15
MSH5-213ENST00000468136 A8MWL6 223 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 CT45A10P0DMU9 189 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 GNG5P63218 68 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 GOLT1AQ6ZVE7 132 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 ATP5L2Q7Z4Y8 100 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 EXOC3-AS1Q8N2X6 119 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 MYOZ3Q8TDC0 251 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 UBE2E2Q96LR5 201 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 NDFIP1Q9BT67 221 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 DAZ1Q9NQZ3 744 aaKnown RBP7.85□□□□□ -1.15
MSH5-213ENST00000468136 LINC00527Q9UJ94 153 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 PSG8Q9UQ74 426 aa7.85□□□□□ -1.15
MSH5-213ENST00000468136 XKRY2A2RUG3 117 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 P01737 135 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 Q6AWC8 147 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 CIARTQ8N365 385 aaPredicted RBP7.84□□□□□ -1.15
MSH5-213ENST00000468136 SIGLECL1Q8N7X8 197 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 TSKUQ8WUA8 353 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 GLMPQ8WWB7 406 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 GNB1LQ9BYB4 327 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 AURKAIP1Q9NWT8 199 aaPredicted RBP7.84□□□□□ -1.15
MSH5-213ENST00000468136 PPP1R14DQ9NXH3 145 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 NAT8BQ9UHF3 227 aa7.84□□□□□ -1.15
MSH5-213ENST00000468136 TRAV34A0A0B4J273 112 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 C19orf71A6NCJ1 209 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 IZUMO1RA6ND01 250 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 C5orf52A6NGY3 159 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 NPIPB6E9PJ23 425 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 LGALS9O00182 355 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 IGLV2-11P01706 119 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 TRGC2P03986 189 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 LGALS1P09382 135 aaKnown RBP7.83□□□□□ -1.16
MSH5-213ENST00000468136 SRSF2Q01130 221 aaKnown RBP7.83□□□□□ -1.16
MSH5-213ENST00000468136 OR5I1Q13606 314 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 ACTL10Q5JWF8 245 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 REC114Q7Z4M0 266 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 GBGT1Q8N5D6 347 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 NUDT10Q8NFP7 164 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 WIPF2Q8TF74 440 aaPredicted RBP7.83□□□□□ -1.16
MSH5-213ENST00000468136 NUDT11Q96G61 164 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 LINC00479Q96M42 142 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 JMJD8Q96S16 334 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 KLK15Q9H2R5 256 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 RPP21Q9H633 154 aaKnown RBP7.83□□□□□ -1.16
MSH5-213ENST00000468136 SERTAD4Q9NUC0 356 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 RPH3ALQ9UNE2 315 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 LENEPQ9Y5L5 61 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 SMAD5-AS1Q9Y6J3 95 aa7.83□□□□□ -1.16
MSH5-213ENST00000468136 IGHV7-4-1A0A0J9YVY3 117 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 TRBV7-9A0A0J9YWB2 115 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 A0A1B0GW15 77 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 SLC17A3O00476 420 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 UBE2CO00762 179 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 CHEK1O14757 476 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 SMAD7O15105 426 aaKnown RBP7.82□□□□□ -1.16
MSH5-213ENST00000468136 HLA-DQA1P01909 254 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 S100A8P05109 93 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 FOXA3P55318 350 aaPredicted RBP7.82□□□□□ -1.16
MSH5-213ENST00000468136 RPS20P60866 119 aaKnown RBP7.82□□□□□ -1.16
MSH5-213ENST00000468136 LCN12Q6JVE5 192 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 Q6ZS46 218 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 PRNTQ86SH4 94 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 C17orf77Q96MU5 243 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 RNASE7Q9H1E1 156 aaKnown RBP7.82□□□□□ -1.16
MSH5-213ENST00000468136 TRAPPC1Q9Y5R8 145 aa7.82□□□□□ -1.16
MSH5-213ENST00000468136 CHD6Q8TD26 2715 aa7.81□□□□□ -1.16
MSH5-213ENST00000468136 IGHV3-35A0A0C4DH35 117 aa7.81□□□□□ -1.16
MSH5-213ENST00000468136 A8MWP6 167 aa7.81□□□□□ -1.16
MSH5-213ENST00000468136 H3BTX0 84 aa7.81□□□□□ -1.16
MSH5-213ENST00000468136 OVOL1O14753 267 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms