RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 MBD2Q9UBB5 411 aa3.73□□□□□ -1.81
U2AF1-207ENST00000468039 MLXQ9UH92 298 aa3.73□□□□□ -1.81
U2AF1-207ENST00000468039 STARD9Q9P2P6 4700 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 A0A087WZ39 114 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 PMS2P5A8MQ11 134 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 A8MWP6 167 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 INMT-MINDY4F8WBC2 141 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 LGALS9O00182 355 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 CORTO00230 105 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 NDUFA4O00483 81 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 SYNGR2O43760 224 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 CCNKO75909 580 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 CDK2AP2O75956 126 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 DFFBO76075 338 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 SIX6O95475 246 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 TMEM50AO95807 157 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 IFNA21P01568 189 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 IFNA4P05014 189 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 SLC25A6P12236 298 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 LINC01547P58512 204 aaPredicted RBP3.72□□□□□ -1.81
U2AF1-207ENST00000468039 DEFA1P59665 94 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 DEFA3P59666 94 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 RIGQ13278 110 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 PLECQ15149 4684 aaKnown RBP3.72□□□□□ -1.81
U2AF1-207ENST00000468039 GUCA2BQ16661 112 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 HAGHQ16775 308 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 IAH1Q2TAA2 248 aaPredicted RBP3.72□□□□□ -1.81
U2AF1-207ENST00000468039 DEFB114Q30KQ6 69 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 SPANXN5Q5MJ07 72 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 TOMM20LQ6UXN7 152 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 TMEM61Q8N0U2 210 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 C12orf45Q8N5I9 185 aaPredicted RBP3.72□□□□□ -1.81
U2AF1-207ENST00000468039 OR4C5Q8NGB2 326 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 RNASEH2CQ8TDP1 164 aaKnown RBP3.72□□□□□ -1.81
U2AF1-207ENST00000468039 WFDC10AQ9H1F0 79 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 GEMIN7Q9H840 131 aaKnown RBP3.72□□□□□ -1.81
U2AF1-207ENST00000468039 MDFICQ9P1T7 246 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 RCL1Q9Y2P8 373 aaKnown RBP3.72□□□□□ -1.81
U2AF1-207ENST00000468039 UFC1Q9Y3C8 167 aa3.72□□□□□ -1.81
U2AF1-207ENST00000468039 LSM5Q9Y4Y9 91 aaKnown RBP3.72□□□□□ -1.81
U2AF1-207ENST00000468039 PUS1Q9Y606 427 aaKnown RBP eCLIP3.72□□□□□ -1.81
U2AF1-207ENST00000468039 SACSQ9NZJ4 4579 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 IGKV3-7A0A075B6H7 116 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 IGLV9-49A0A0B4J1Y8 123 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 TRAV25A0A0B4J276 109 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 PIGBOS1A0A0B4J2F0 54 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 IGHV7-4-1A0A0J9YVY3 117 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 SNURFLB1AK76 121 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 SMIM1B2RUZ4 78 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 GOSR2O14653 212 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 CIDEAO60543 219 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 MED6O75586 246 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 IGKV1-17P01599 117 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 IL5P05113 134 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 CD7P09564 240 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 METTL15P1P0C7V9 234 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 IGLC1P0CG04 106 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 OR10J1P30954 320 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 PAX9P55771 341 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 S100A10P60903 97 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 RAB11AP62491 216 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 ZNF90Q03938 601 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 OR8G2PQ6IF36 304 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 LCN12Q6JVE5 192 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 GSG1LQ6UXU4 331 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 ZNF600Q6ZNG1 722 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 LINC00518Q8N0U6 118 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 OR1S2Q8NGQ3 325 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 OR1L4Q8NGR5 311 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 OR4X1Q8NH49 305 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 SLC35E1Q96K37 410 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 DAZ1Q9NQZ3 744 aaKnown RBP3.71□□□□□ -1.82
U2AF1-207ENST00000468039 SIGLEC8Q9NYZ4 499 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 PSENENQ9NZ42 101 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 U3KQ87 197 aa3.71□□□□□ -1.82
U2AF1-207ENST00000468039 DYNC2H1Q8NCM8 4307 aaKnown RBP3.7□□□□□ -1.82
U2AF1-207ENST00000468039 IGKV1D-37A0A075B6S9 117 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 TRAV14DV4A0A0A6YYC5 116 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 SMCO3A2RU48 225 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 FAM24AA6NFZ4 105 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 ZFP92A6NM28 416 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 K7EMT4 169 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 K7EPK0 472 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 SSNA1O43805 119 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 FRMD6-AS1P0C7T7 363 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 C8orf88P0DMB2 117 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 SLC25A4P12235 298 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 GATA2P23769 480 aaPredicted RBP3.7□□□□□ -1.82
U2AF1-207ENST00000468039 TFPI2P48307 235 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 BCAP31P51572 246 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 RRAS2P62070 204 aaPredicted RBP3.7□□□□□ -1.82
U2AF1-207ENST00000468039 EWSR1Q01844 656 aaKnown RBP eCLIP3.7□□□□□ -1.82
U2AF1-207ENST00000468039 OR2F1Q13607 317 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 USF2Q15853 346 aaPredicted RBP3.7□□□□□ -1.82
U2AF1-207ENST00000468039 RNASEKQ6P5S7 137 aaKnown RBP3.7□□□□□ -1.82
U2AF1-207ENST00000468039 ACOT7LQ6ZUV0 252 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 GTSCR1Q86UQ5 136 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 DEFB125Q8N687 156 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 MARC2Q969Z3 335 aa3.7□□□□□ -1.82
U2AF1-207ENST00000468039 CIB3Q96Q77 187 aaPredicted RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms