RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TCRBV4S1A1TA0A5B7 111 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 M0R233 179 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 KPNA4O00629 521 aaPredicted RBP0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 DEGS1O15121 323 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 IGLV1-51P01701 117 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 MT-ND6P03923 174 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 NDUFA6P56556 154 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 RPS28P62857 69 aaKnown RBP0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 CDK6Q00534 326 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 CDK5R1Q15078 307 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 VMA21Q3ZAQ7 101 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 C10orf55Q5SWW7 151 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 C4orf22Q6V702 233 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 LINC00305Q7Z4B0 112 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 Q8N814 137 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 TMEM229BQ8NBD8 167 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 OR5D14Q8NGL3 314 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 ZNF563Q8TA94 476 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 C4orf3Q8WVX3 66 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 MAFIPQ8WZ33 124 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 NAA38Q9BRA0 125 aaKnown RBP0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 LXNQ9BS40 222 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 REG4Q9BYZ8 158 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 RTL9Q8NET4 1388 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 ANKRD31Q8N7Z5 1873 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 SCN8AQ9UQD0 1980 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 RP1P56715 2156 aa0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 KMT2BQ9UMN6 2715 aaPredicted RBP0.77□□□□□ -2.29
GTF3C3-209ENST00000466862 NUP210Q8TEM1 1887 aaPredicted RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 GBF1Q92538 1859 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 MYO5AQ9Y4I1 1855 aaKnown RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 CEP152O94986 1710 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 A2MP01023 1474 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 TCOF1Q13428 1488 aaKnown RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 OVOS2A0A0G2JMS6 1433 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 TRBV6-8A0A0A6YYG3 113 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 TRBV7-6A0A0J9YX20 115 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 A0A1B0GX51 115 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 OR2T8A6NH00 312 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 E7EUB6 86 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 H3BMG7 143 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 M0QZK8 103 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 LYRM1O43325 122 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 MRPS14O60783 128 aaKnown RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 HYPMO75409 117 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 CD2P06729 351 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 RNASE3P12724 160 aaKnown RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 SDC4P31431 198 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 DSCR4P56555 118 aaPredicted RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 CNBPP62633 177 aaKnown RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 MRPS36P82909 103 aaKnown RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 SMCO1Q147U7 214 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 CCDC153Q494R4 210 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 C1orf137Q5JT78 98 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 C1orf134Q5TEV5 83 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 TEX261Q6UWH6 196 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 TMEM14EPQ6UXP3 125 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 OR8I2Q8N0Y5 310 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 Q8N2B8 174 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 FAM216BQ8N7L0 139 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 C15orf53Q8NAA6 179 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 OR5H6Q8NGV6 325 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 BRK1Q8WUW1 75 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 LZICQ8WZA0 190 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 RAB37Q96AX2 223 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 HYLS1Q96M11 299 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 PRELID3AQ96N28 172 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 TP53RKQ96S44 253 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 MED9Q9NWA0 146 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 SPANXCQ9NY87 97 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 RASL12Q9NYN1 266 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 TAS2R7Q9NYW3 318 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 KLK9Q9UKQ9 250 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 SNURFQ9Y675 71 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 U3KQ87 197 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 PRRC2BQ5JSZ5 2229 aaKnown RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 FREM1Q5H8C1 2179 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 BAZ2BQ9UIF8 2168 aaKnown RBP0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 HEATR5BQ9P2D3 2071 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 EML6Q6ZMW3 1958 aa0.76□□□□□ -2.29
GTF3C3-209ENST00000466862 DLC1Q96QB1 1528 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 ZCCHC6Q5VYS8 1495 aaKnown RBP0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 FAM135BQ49AJ0 1406 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 TRAV10A0A0B4J240 114 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 TRAV13-1A0A0B4J241 112 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 TRBV27A0A0K0K1C4 114 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 A0A1B0GW64 132 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 hDV103S1A0JD37 113 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 TMEM189A5PLL7 270 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 CCDC160A6NGH7 325 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 CRYGSP22914 178 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 CMPK1P30085 196 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 ZNF93P35789 620 aaPredicted RBP0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 PSG9Q00887 426 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 Q5XG85 94 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 C2orf82Q6UX34 121 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 LRRC18Q8N456 261 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 OR4B1Q8NGF8 309 aa0.75□□□□□ -2.29
GTF3C3-209ENST00000466862 OR51A4Q8NGJ6 313 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms