RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 ETFRF1Q6IPR1 90 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 TCF24Q7RTU0 167 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 RXFP4Q8TDU9 374 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 SLC35E1Q96K37 410 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 RCHY1Q96PM5 261 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 FAM110AQ9BQ89 295 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 SCRT1Q9BWW7 348 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 ACTR3CQ9C0K3 210 aaPredicted RBP7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 RETNQ9HD89 108 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 SLC39A9Q9NUM3 307 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 C19orf73Q9NVV2 129 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 SMPXQ9UHP9 88 aa7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 HUWE1Q7Z6Z7 4374 aaKnown RBP7.29□□□□□ -1.24
RTFDC1-205ENST00000466260 TRAV30A0A087WSZ9 112 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 TRAV25A0A0B4J276 109 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 CTXND1A0A1B0GTU2 59 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 LOC102723971A0A1B0GUV8 181 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 SMCO3A2RU48 225 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 ZFP92A6NM28 416 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 SRP19P09132 144 aaKnown RBP7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 IGLC1P0CG04 106 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 RAB5AP20339 215 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 PSMB3P49720 205 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 RAB31Q13636 194 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 HAGHQ16775 308 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 Q8WTZ3 238 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 METTL26Q96S19 204 aa7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 SPAG8Q99932 426 aaPredicted RBP7.28□□□□□ -1.24
RTFDC1-205ENST00000466260 MAP1LC3B2A6NCE7 125 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 RBMY1BA6NDE4 496 aaKnown RBP7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 RBMY1EA6NEQ0 496 aaKnown RBP7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 OR4C46A6NHA9 309 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 FNDC10F2Z333 226 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 H3BQ15 152 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 IGKV1-17P01599 117 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 IL4P05112 153 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 RBMY1DP0C7P1 496 aaKnown RBP7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 METTL15P1P0C7V9 234 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 SMIM6P0DI80 62 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 NPPCP23582 126 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 BMI1P35226 326 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 ICAM4Q14773 271 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 ZNF124Q15973 351 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 VWC2Q2TAL6 325 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 HIST1H2BAQ96A08 127 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 WWC2-AS2Q96NR7 200 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 MAP1LC3BQ9GZQ8 125 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 SAV1Q9H4B6 383 aaPredicted RBP7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 RABAC1Q9UI14 185 aa7.27□□□□□ -1.25
RTFDC1-205ENST00000466260 A8MZ25 164 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 RPL35AP18077 110 aaKnown RBP7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 FHITP49789 147 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 LYZP61626 148 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 ZNF90Q03938 601 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 USF2Q15853 346 aaPredicted RBP7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 ODF3L2Q3SX64 289 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 OR8G2PQ6IF36 304 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 APRG1Q8IVJ8 170 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 LINC00518Q8N0U6 118 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 STXBP6Q8NFX7 210 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 SPATA25Q9BR10 227 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 TM2D3Q9BRN9 247 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 RPRMQ9NS64 109 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 GNG13Q9P2W3 67 aa7.26□□□□□ -1.25
RTFDC1-205ENST00000466260 LOC102724200A0A096LPH7 203 aaPredicted RBP7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 UBE2L5PA0A1B0GUS4 154 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 A0A1W2PS18 150 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 C9JQL5 133 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 PDE6DO43924 150 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 TOMM40O96008 361 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 RD3LP0DJH9 198 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 PSG1P11464 419 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 S100PP25815 95 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 AKR1D1P51857 326 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 PAFAH1B2P68402 229 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 DLK1P80370 383 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 MEF2BQ02080 365 aaPredicted RBP7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 GAMTQ14353 236 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 OR51G1Q8NGK1 321 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 VSIRQ9H7M9 311 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 NAT8Q9UHE5 227 aa7.25□□□□□ -1.25
RTFDC1-205ENST00000466260 IGKV1D-37A0A075B6S9 117 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 F6UZH7 168 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 UBE2CO00762 179 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 PPP1R2P9O14990 202 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 FGF7P21781 194 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 CRYBB3P26998 211 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 YPEL3P61236 119 aaPredicted RBP7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 RPL19P84098 196 aaKnown RBP7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 FAM90A2PQ658T7 463 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 LEMD1Q68G75 181 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 CYP2G1PQ6ZSU1 146 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 FAM24BQ8N5W8 94 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 OR10G9Q8NGN4 311 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 OR10G7Q8NGN6 311 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 ANAPC16Q96DE5 110 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 RNF125Q96EQ8 232 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 GRAMD2BQ96HH9 432 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 GGTLC1Q9BX51 225 aa7.24□□□□□ -1.25
RTFDC1-205ENST00000466260 MS4A6AQ9H2W1 248 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms