RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 BAGE2Q86Y30 109 aa14.52□□□□□ -0.09
CAPN3-209ENST00000466222 A0A1B0GUS0 222 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 SERF1AO75920 110 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 ZNF355PQ9NSJ1 428 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 IZUMO1RA6ND01 250 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 FOSL1P15407 271 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 LINC00310P59036 64 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 TMEM136Q6ZRR5 245 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 NPIPB3Q92617 1050 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 SMIM12Q96EX1 92 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 RNASE7Q9H1E1 156 aaKnown RBP14.51□□□□□ -0.09
CAPN3-209ENST00000466222 NAT8BQ9UHF3 227 aa14.51□□□□□ -0.09
CAPN3-209ENST00000466222 IGKV1D-37A0A075B6S9 117 aa14.5□□□□□ -0.09
CAPN3-209ENST00000466222 TRAV41A0A0B4J266 112 aa14.5□□□□□ -0.09
CAPN3-209ENST00000466222 C19orf54Q5BKX5 351 aa14.5□□□□□ -0.09
CAPN3-209ENST00000466222 MRPL52Q86TS9 123 aaKnown RBP14.5□□□□□ -0.09
CAPN3-209ENST00000466222 NSD1Q96L73 2696 aaPredicted RBP14.5□□□□□ -0.09
CAPN3-209ENST00000466222 IGLV11-55A0A075B6I3 123 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 I3L2K1 104 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 K7EIM0 57 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 CORTO00230 105 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 OR2J3O76001 311 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 IGF1P05019 195 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 MGST1P10620 155 aaKnown RBP14.49□□□□□ -0.09
CAPN3-209ENST00000466222 ZNF329Q86UD4 541 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 WIPF2Q8TF74 440 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-209ENST00000466222 TRAV5A0A0B4J249 113 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 FAM181BA6NEQ2 426 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 ZNF705FA8MVS1 300 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-209ENST00000466222 PEX7O00628 323 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 NDUFB8O95169 186 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 ZNF705DP0CH99 300 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-209ENST00000466222 ZNF705BP0CI00 300 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-209ENST00000466222 PATE2Q6UY27 113 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 FAM110DQ8TAY7 271 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-209ENST00000466222 TRGV9Q99603 122 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 ZNF702PQ9H963 129 aa14.49□□□□□ -0.09
CAPN3-209ENST00000466222 NIPBLQ6KC79 2804 aaeCLIP14.48□□□□□ -0.09
CAPN3-209ENST00000466222 A0A1B0GV90 55 aa14.48□□□□□ -0.09
CAPN3-209ENST00000466222 IGHV3-23P01764 117 aa14.48□□□□□ -0.09
CAPN3-209ENST00000466222 MORN5Q5VZ52 161 aa14.48□□□□□ -0.09
CAPN3-209ENST00000466222 C10orf99Q6UWK7 81 aa14.48□□□□□ -0.09
CAPN3-209ENST00000466222 TEX43Q6ZNM6 134 aa14.48□□□□□ -0.09
CAPN3-209ENST00000466222 LCNL1Q6ZST4 164 aa14.48□□□□□ -0.09
CAPN3-209ENST00000466222 Q6ZWC4 215 aa14.47□□□□□ -0.09
CAPN3-209ENST00000466222 FXYD5Q96DB9 178 aa14.47□□□□□ -0.09
CAPN3-209ENST00000466222 GRAMD2BQ96HH9 432 aa14.47□□□□□ -0.09
CAPN3-209ENST00000466222 SAMD10Q9BYL1 202 aa14.47□□□□□ -0.09
CAPN3-209ENST00000466222 PPIFP30405 207 aaKnown RBP14.47□□□□□ -0.09
CAPN3-209ENST00000466222 SRSF2Q01130 221 aaKnown RBP14.47□□□□□ -0.09
CAPN3-209ENST00000466222 TMEM190Q8WZ59 177 aa14.47□□□□□ -0.09
CAPN3-209ENST00000466222 C20orf144Q9BQM9 153 aa14.47□□□□□ -0.09
CAPN3-209ENST00000466222 GNB4Q9HAV0 340 aa14.47□□□□□ -0.09
CAPN3-209ENST00000466222 ZNF331Q9NQX6 463 aaPredicted RBP14.47□□□□□ -0.09
CAPN3-209ENST00000466222 SERTAD4Q9NUC0 356 aa14.47□□□□□ -0.09
CAPN3-209ENST00000466222 MYCNOSP40205 109 aa14.46□□□□□ -0.09
CAPN3-209ENST00000466222 CRIP2P52943 208 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-209ENST00000466222 USF2Q15853 346 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-209ENST00000466222 KLK15Q9H2R5 256 aa14.46□□□□□ -0.09
CAPN3-209ENST00000466222 FN1P02751 2386 aaKnown RBP14.46□□□□□ -0.1
CAPN3-209ENST00000466222 PYYP10082 97 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 TMEM183BQ1AE95 376 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 TOMM20LQ6UXN7 152 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 LINC00305Q7Z4B0 112 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 TMEM86BQ8N661 226 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 KCNS1Q96KK3 526 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 NPFFR1Q9GZQ6 430 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 ZNF586Q9NXT0 402 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 FBXL7Q9UJT9 491 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 PLP1P60201 277 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 TMEM116Q8NCL8 245 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 PRSS22Q9GZN4 317 aa14.45□□□□□ -0.1
CAPN3-209ENST00000466222 F8P00451 2351 aa14.44□□□□□ -0.1
CAPN3-209ENST00000466222 GPX1P07203 203 aa14.44□□□□□ -0.1
CAPN3-209ENST00000466222 HIST1H1EP10412 219 aaKnown RBP14.44□□□□□ -0.1
CAPN3-209ENST00000466222 RHOGP84095 191 aa14.44□□□□□ -0.1
CAPN3-209ENST00000466222 M0R143 59 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 APCSP02743 223 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 SNRPCP09234 159 aaKnown RBP14.43□□□□□ -0.1
CAPN3-209ENST00000466222 FRMD6-AS1P0C7T7 363 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 TCL1AP56279 114 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 UBE2G1P62253 170 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 C15orf32Q32M92 178 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 TMEM68Q96MH6 324 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 MRPL27Q9P0M9 148 aaKnown RBP14.43□□□□□ -0.1
CAPN3-209ENST00000466222 EPDR1Q9UM22 224 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 F8W735 103 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-209ENST00000466222 BMPR1BO00238 502 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 CFHR3Q02985 330 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 KLF12Q9Y4X4 402 aa14.43□□□□□ -0.1
CAPN3-209ENST00000466222 MRPL54Q6P161 138 aaKnown RBP14.42□□□□□ -0.1
CAPN3-209ENST00000466222 ATP5L2Q7Z4Y8 100 aa14.42□□□□□ -0.1
CAPN3-209ENST00000466222 ZNF418Q8TF45 676 aaPredicted RBP14.42□□□□□ -0.1
CAPN3-209ENST00000466222 MAST4O15021 2626 aa14.42□□□□□ -0.1
CAPN3-209ENST00000466222 SPINK4O60575 86 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 ZNF253O75346 499 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 HYPMO75409 117 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 HILS1P60008 231 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 Q6ZSV7 163 aa14.41□□□□□ -0.1
CAPN3-209ENST00000466222 NUDT10Q8NFP7 164 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms