RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 MRPL54Q6P161 138 aaKnown RBP7.51□□□□□ -1.21
SCAF11-205ENST00000465950 C16orf54Q6UWD8 224 aa7.51□□□□□ -1.21
SCAF11-205ENST00000465950 KIR2DL5AQ8N109 375 aa7.51□□□□□ -1.21
SCAF11-205ENST00000465950 C5orf56Q8N8D9 126 aa7.51□□□□□ -1.21
SCAF11-205ENST00000465950 KIR2DL5BQ8NHK3 375 aa7.51□□□□□ -1.21
SCAF11-205ENST00000465950 MARVELD1Q9BSK0 173 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 RPP21Q9H633 154 aaKnown RBP7.5□□□□□ -1.21
SCAF11-205ENST00000465950 MYLKQ15746 1914 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 PAX9P55771 341 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 C6orf226Q5I0X4 101 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 TP53RKQ96S44 253 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 JPT2Q9H910 190 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 PCNX1Q96RV3 2341 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 INSL4Q14641 139 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 CRYBB3P26998 211 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 RNF182Q8N6D2 247 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 IGF2BP2-AS1Q96M15 143 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 CBLN1P23435 193 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 TCL1AP56279 114 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 SRSF1Q07955 248 aaKnown RBP eCLIP7.5□□□□□ -1.21
SCAF11-205ENST00000465950 SCGB3A1Q96QR1 104 aa7.5□□□□□ -1.21
SCAF11-205ENST00000465950 TRAV9-1A0A075B6T8 112 aa7.49□□□□□ -1.21
SCAF11-205ENST00000465950 C5orf52A6NGY3 159 aa7.49□□□□□ -1.21
SCAF11-205ENST00000465950 IGHV3-53P01767 116 aa7.49□□□□□ -1.21
SCAF11-205ENST00000465950 NDPQ00604 133 aa7.49□□□□□ -1.21
SCAF11-205ENST00000465950 THAP8Q8NA92 274 aa7.49□□□□□ -1.21
SCAF11-205ENST00000465950 PGLYRP4Q96LB8 373 aa7.49□□□□□ -1.21
SCAF11-205ENST00000465950 M0R143 59 aa7.49□□□□□ -1.21
SCAF11-205ENST00000465950 NEGR1Q7Z3B1 354 aa7.49□□□□□ -1.21
SCAF11-205ENST00000465950 M0R2P5 195 aa7.49□□□□□ -1.21
SCAF11-205ENST00000465950 LGALS9O00182 355 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 CST9LQ9H4G1 147 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 NHP2Q9NX24 153 aaKnown RBP7.48□□□□□ -1.21
SCAF11-205ENST00000465950 IGHG4P01861 327 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 SPNP16150 400 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 SLURP1P55000 103 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 C17orf58Q2M2W7 97 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 Q6ZSV7 163 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 ORMDL3Q8N138 153 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 HELZP42694 1942 aaKnown RBP7.48□□□□□ -1.21
SCAF11-205ENST00000465950 IGHV1-24A0A0C4DH33 117 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 IGKV1-12A0A0C4DH73 117 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 NDUFB4O95168 129 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 IGKV1D-12P01611 117 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 C11orf71Q6IPW1 123 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 WDR83OSQ9Y284 106 aa7.48□□□□□ -1.21
SCAF11-205ENST00000465950 ATP6V0E2Q8NHE4 81 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 WFDC6Q9BQY6 131 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 DCAF16Q9NXF7 216 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 LY6G6CO95867 125 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 ZNF876PQ49A33 203 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 ZNF491Q8N8L2 437 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 C16orf95Q9H693 158 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 CTSZQ9UBR2 303 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 NOTCH2Q04721 2471 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 FER1L5A0AVI2 2057 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 C2orf70A6NJV1 201 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 IFITM10A6NMD0 228 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.47□□□□□ -1.21
SCAF11-205ENST00000465950 IGLL1P15814 213 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 FXYD7P58549 80 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 SLC25A34Q6PIV7 304 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 ZNF114Q8NC26 417 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 TMEM131Q92545 1883 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 TRBV7-9A0A0J9YWB2 115 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 H3BTX0 84 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 SPINK4O60575 86 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 POU2AF1Q16633 256 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 HIST2H2BCQ6DN03 193 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 LAIR2Q6ISS4 152 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 TEX43Q6ZNM6 134 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 FAM210AQ96ND0 272 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 PRR25Q96S07 402 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 TMA7Q9Y2S6 64 aaKnown RBP7.47□□□□□ -1.21
SCAF11-205ENST00000465950 V9GYH0 126 aa7.47□□□□□ -1.21
SCAF11-205ENST00000465950 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.21
SCAF11-205ENST00000465950 SMIM12Q96EX1 92 aa7.46□□□□□ -1.21
SCAF11-205ENST00000465950 DNAJC30Q96LL9 226 aa7.46□□□□□ -1.21
SCAF11-205ENST00000465950 NDUFA12Q9UI09 145 aa7.46□□□□□ -1.21
SCAF11-205ENST00000465950 A0A1W2PPI3 338 aa7.46□□□□□ -1.22
SCAF11-205ENST00000465950 RNF224P0DH78 156 aa7.46□□□□□ -1.22
SCAF11-205ENST00000465950 C10orf55Q5SWW7 151 aa7.46□□□□□ -1.22
SCAF11-205ENST00000465950 TMEM170BQ5T4T1 132 aa7.46□□□□□ -1.22
SCAF11-205ENST00000465950 LIME1Q9H400 295 aa7.46□□□□□ -1.22
SCAF11-205ENST00000465950 COL5A1P20908 1838 aaPredicted RBP7.46□□□□□ -1.22
SCAF11-205ENST00000465950 TRAV8-3A0A0A6YYJ7 113 aa7.46□□□□□ -1.22
SCAF11-205ENST00000465950 SFTA3P0C7M3 94 aa7.46□□□□□ -1.22
SCAF11-205ENST00000465950 RNASE2P10153 161 aaKnown RBP7.46□□□□□ -1.22
SCAF11-205ENST00000465950 NDUFA4L2Q9NRX3 87 aa7.46□□□□□ -1.22
SCAF11-205ENST00000465950 IGKV1OR2-108A0A075B7D4 117 aa7.45□□□□□ -1.22
SCAF11-205ENST00000465950 GUSBP1Q15486 140 aa7.45□□□□□ -1.22
SCAF11-205ENST00000465950 SPINK13Q1W4C9 94 aa7.45□□□□□ -1.22
SCAF11-205ENST00000465950 USF3Q68DE3 2245 aa7.45□□□□□ -1.22
SCAF11-205ENST00000465950 SDK2Q58EX2 2172 aa7.45□□□□□ -1.22
SCAF11-205ENST00000465950 LOC389332A0A1B0GUA5 103 aa7.45□□□□□ -1.22
SCAF11-205ENST00000465950 PMS2P5A8MQ11 134 aa7.45□□□□□ -1.22
SCAF11-205ENST00000465950 ZNF503Q96F45 646 aa7.45□□□□□ -1.22
SCAF11-205ENST00000465950 DEFA6Q01524 100 aa7.45□□□□□ -1.22
SCAF11-205ENST00000465950 IGHV4OR15-8A0A075B7B6 117 aa7.44□□□□□ -1.22
SCAF11-205ENST00000465950 A0A087WW49 117 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms