RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ZFAND6Q6FIF0 208 aa13.04□□□□□ -0.32
CPSF4-209ENST00000465132 FAM122CQ6P4D5 195 aa13.04□□□□□ -0.32
CPSF4-209ENST00000465132 LCN15Q6UWW0 184 aa13.04□□□□□ -0.32
CPSF4-209ENST00000465132 EDA2RQ9HAV5 297 aa13.04□□□□□ -0.32
CPSF4-209ENST00000465132 IGKV3-7A0A075B6H7 116 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 TEX46H3BTG2 121 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 ISLRO14498 428 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 OR7C2O60412 319 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 RAB2AP61019 212 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 PDE6HQ13956 83 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 GCSAMLQ5JQS6 135 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 SLC50A1Q9BRV3 221 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 PAXXQ9BUH6 204 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 OR51M1Q9H341 326 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 HRH4Q9H3N8 390 aa13.03□□□□□ -0.32
CPSF4-209ENST00000465132 EPPK1P58107 5090 aaKnown RBP13.03□□□□□ -0.32
CPSF4-209ENST00000465132 CTXND1A0A1B0GTU2 59 aa13.02□□□□□ -0.33
CPSF4-209ENST00000465132 ZNF253O75346 499 aa13.02□□□□□ -0.33
CPSF4-209ENST00000465132 HIST1H1EP10412 219 aaKnown RBP13.02□□□□□ -0.33
CPSF4-209ENST00000465132 PSMB3P49720 205 aa13.02□□□□□ -0.33
CPSF4-209ENST00000465132 NKX2-5P52952 324 aaPredicted RBP13.02□□□□□ -0.33
CPSF4-209ENST00000465132 PSG9Q00887 426 aa13.02□□□□□ -0.33
CPSF4-209ENST00000465132 GBGT1Q8N5D6 347 aa13.02□□□□□ -0.33
CPSF4-209ENST00000465132 C16orf92Q96LL3 132 aa13.02□□□□□ -0.33
CPSF4-209ENST00000465132 RPRMQ9NS64 109 aa13.02□□□□□ -0.33
CPSF4-209ENST00000465132 LYSTQ99698 3801 aa13.02□□□□□ -0.33
CPSF4-209ENST00000465132 STARD9Q9P2P6 4700 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 IZUMO1RA6ND01 250 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 OR11H12B2RN74 326 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 K7EQG2 157 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 CXorf1O96002 111 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 TFPI2P48307 235 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 CD81P60033 236 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 MIR17HGQ75NE6 70 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 WFDC3Q8IUB2 231 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 RPP25LQ8N5L8 163 aaKnown RBP13.01□□□□□ -0.33
CPSF4-209ENST00000465132 TMED6Q8WW62 240 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 RAB24Q969Q5 203 aa13.01□□□□□ -0.33
CPSF4-209ENST00000465132 BIRC6Q9NR09 4857 aa13□□□□□ -0.33
CPSF4-209ENST00000465132 UBE2L3P68036 154 aaKnown RBP13□□□□□ -0.33
CPSF4-209ENST00000465132 DCANP1Q8TF63 244 aa13□□□□□ -0.33
CPSF4-209ENST00000465132 SLC25A2Q9BXI2 301 aa13□□□□□ -0.33
CPSF4-209ENST00000465132 TMEM167BQ9NRX6 74 aa13□□□□□ -0.33
CPSF4-209ENST00000465132 DNAH1Q9P2D7 4330 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 TRAV5A0A0B4J249 113 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 STAG3L2P0CL84 134 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 STAG3L3P0CL85 134 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 IGLC2P0DOY2 106 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 FAM74A1Q5RGS3 127 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 LYPD1Q8N2G4 141 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 RNF141Q8WVD5 230 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 AAMDCQ9H7C9 122 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 CSMD3Q7Z407 3707 aa12.99□□□□□ -0.33
CPSF4-209ENST00000465132 NBEAP1P0C6P0 100 aa12.98□□□□□ -0.33
CPSF4-209ENST00000465132 HAGHQ16775 308 aa12.98□□□□□ -0.33
CPSF4-209ENST00000465132 MORN5Q5VZ52 161 aa12.98□□□□□ -0.33
CPSF4-209ENST00000465132 SPATA31B1PQ5VZV4 182 aa12.98□□□□□ -0.33
CPSF4-209ENST00000465132 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.98□□□□□ -0.33
CPSF4-209ENST00000465132 FAM167A-AS1Q96KT0 104 aa12.98□□□□□ -0.33
CPSF4-209ENST00000465132 SPATA25Q9BR10 227 aa12.98□□□□□ -0.33
CPSF4-209ENST00000465132 PRELID1Q9Y255 219 aa12.98□□□□□ -0.33
CPSF4-209ENST00000465132 RFNGQ9Y644 331 aa12.98□□□□□ -0.33
CPSF4-209ENST00000465132 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
CPSF4-209ENST00000465132 BOLA2-SMG1P6H3BVE0 249 aa12.97□□□□□ -0.33
CPSF4-209ENST00000465132 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
CPSF4-209ENST00000465132 H2AFB1P0C5Y9 115 aa12.97□□□□□ -0.33
CPSF4-209ENST00000465132 SULT1A2P50226 295 aa12.97□□□□□ -0.33
CPSF4-209ENST00000465132 PPT1P50897 306 aa12.97□□□□□ -0.33
CPSF4-209ENST00000465132 FAM213BQ8TBF2 198 aa12.97□□□□□ -0.33
CPSF4-209ENST00000465132 SELENOKQ9Y6D0 94 aa12.97□□□□□ -0.33
CPSF4-209ENST00000465132 HBE1P02100 147 aa12.96□□□□□ -0.33
CPSF4-209ENST00000465132 NKX6-2Q9C056 277 aaPredicted RBP12.96□□□□□ -0.33
CPSF4-209ENST00000465132 TUBA4BQ9H853 241 aa12.96□□□□□ -0.33
CPSF4-209ENST00000465132 MAP1LC3B2A6NCE7 125 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 IFNA7P01567 189 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 OR10J4P0C629 311 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 ZNF688P0C7X2 276 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 ARL14EPLP0DKL9 152 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 PYYP10082 97 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 BLOC1S1P78537 153 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 EBLN2Q6P2I7 272 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 BLNKQ8WV28 456 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 MBD3L1Q8WWY6 194 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 FXYD5Q96DB9 178 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 LINC00052Q96N35 136 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 MAP1LC3BQ9GZQ8 125 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 MAP6D1Q9H9H5 199 aa12.95□□□□□ -0.34
CPSF4-209ENST00000465132 ZNF331Q9NQX6 463 aaPredicted RBP12.95□□□□□ -0.34
CPSF4-209ENST00000465132 SOCS3O14543 225 aa12.94□□□□□ -0.34
CPSF4-209ENST00000465132 GCHFRP30047 84 aa12.94□□□□□ -0.34
CPSF4-209ENST00000465132 CSN1S1P47710 185 aa12.94□□□□□ -0.34
CPSF4-209ENST00000465132 IQCF2Q8IXL9 164 aa12.94□□□□□ -0.34
CPSF4-209ENST00000465132 RXFP4Q8TDU9 374 aa12.94□□□□□ -0.34
CPSF4-209ENST00000465132 SFT2D1Q8WV19 159 aa12.94□□□□□ -0.34
CPSF4-209ENST00000465132 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
CPSF4-209ENST00000465132 ZNF586Q9NXT0 402 aa12.94□□□□□ -0.34
CPSF4-209ENST00000465132 H3BQ15 152 aa12.93□□□□□ -0.34
CPSF4-209ENST00000465132 CD7P09564 240 aa12.93□□□□□ -0.34
CPSF4-209ENST00000465132 DEFB131AP59861 70 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms