RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 APOC3P02656 99 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 PLP1P60201 277 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 RAB5BP61020 215 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 C21orf62-AS1Q17RA5 79 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 C10orf113Q5VZT2 155 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 Q6ZRG5 221 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 C17orf77Q96MU5 243 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 C2orf88Q9BSF0 95 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 SHANK2-AS3Q9BTD1 123 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 SH3BGRL3Q9H299 93 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 SRD5A3Q9H8P0 318 aa8.84□□□□□ -0.99
APTX-213ENST00000465003 OR4C46A6NHA9 309 aa8.83□□□□□ -1
APTX-213ENST00000465003 IFNA5P01569 189 aa8.83□□□□□ -1
APTX-213ENST00000465003 RPL29P47914 159 aaKnown RBP8.83□□□□□ -1
APTX-213ENST00000465003 RPL7L1Q6DKI1 246 aaKnown RBP8.83□□□□□ -1
APTX-213ENST00000465003 MFFQ9GZY8 342 aa8.83□□□□□ -1
APTX-213ENST00000465003 TUBA4BQ9H853 241 aa8.83□□□□□ -1
APTX-213ENST00000465003 MAP6D1Q9H9H5 199 aa8.83□□□□□ -1
APTX-213ENST00000465003 C5orf52A6NGY3 159 aa8.82□□□□□ -1
APTX-213ENST00000465003 K7EQG2 157 aa8.82□□□□□ -1
APTX-213ENST00000465003 CFDP00746 253 aaPredicted RBP8.82□□□□□ -1
APTX-213ENST00000465003 DEFB131AP59861 70 aa8.82□□□□□ -1
APTX-213ENST00000465003 UQCC3Q6UW78 93 aa8.82□□□□□ -1
APTX-213ENST00000465003 SCGB1C1Q8TD33 95 aa8.82□□□□□ -1
APTX-213ENST00000465003 SEPSECSQ9HD40 501 aaKnown RBP8.82□□□□□ -1
APTX-213ENST00000465003 NRN1Q9NPD7 142 aa8.82□□□□□ -1
APTX-213ENST00000465003 A0A1B0GV90 55 aa8.82□□□□□ -1
APTX-213ENST00000465003 HELTA6NFD8 242 aa8.82□□□□□ -1
APTX-213ENST00000465003 MPDU1O75352 247 aa8.82□□□□□ -1
APTX-213ENST00000465003 CXCL2P19875 107 aa8.82□□□□□ -1
APTX-213ENST00000465003 PAFAH1B2P68402 229 aa8.82□□□□□ -1
APTX-213ENST00000465003 PSMG4Q5JS54 123 aa8.82□□□□□ -1
APTX-213ENST00000465003 FFAR4Q5NUL3 377 aa8.82□□□□□ -1
APTX-213ENST00000465003 ATRAIDQ6UW56 229 aa8.82□□□□□ -1
APTX-213ENST00000465003 SBSPONQ8IVN8 264 aa8.82□□□□□ -1
APTX-213ENST00000465003 ZNF709Q8N972 641 aa8.82□□□□□ -1
APTX-213ENST00000465003 DNAJC4Q9NNZ3 241 aa8.82□□□□□ -1
APTX-213ENST00000465003 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
APTX-213ENST00000465003 NBEAL2Q6ZNJ1 2754 aa8.81□□□□□ -1
APTX-213ENST00000465003 RBMY1BA6NDE4 496 aaKnown RBP8.81□□□□□ -1
APTX-213ENST00000465003 RBMY1EA6NEQ0 496 aaKnown RBP8.81□□□□□ -1
APTX-213ENST00000465003 RBMY1DP0C7P1 496 aaKnown RBP8.81□□□□□ -1
APTX-213ENST00000465003 SPP1P10451 314 aa8.81□□□□□ -1
APTX-213ENST00000465003 RPL35AP18077 110 aaKnown RBP8.81□□□□□ -1
APTX-213ENST00000465003 HLA-DMBP28068 263 aa8.81□□□□□ -1
APTX-213ENST00000465003 SAPCD1Q5SSQ6 148 aa8.81□□□□□ -1
APTX-213ENST00000465003 FAM78BQ5VT40 261 aa8.81□□□□□ -1
APTX-213ENST00000465003 MIR17HGQ75NE6 70 aa8.81□□□□□ -1
APTX-213ENST00000465003 SVBPQ8N300 66 aa8.81□□□□□ -1
APTX-213ENST00000465003 RNF182Q8N6D2 247 aa8.81□□□□□ -1
APTX-213ENST00000465003 CHTOPQ9Y3Y2 248 aaKnown RBP8.81□□□□□ -1
APTX-213ENST00000465003 KNCNA6PVL3 124 aa8.81□□□□□ -1
APTX-213ENST00000465003 TEX46H3BTG2 121 aa8.81□□□□□ -1
APTX-213ENST00000465003 PYYP10082 97 aa8.81□□□□□ -1
APTX-213ENST00000465003 ATP6V0CP27449 155 aa8.81□□□□□ -1
APTX-213ENST00000465003 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.81□□□□□ -1
APTX-213ENST00000465003 C17orf112F2Z3M2 114 aa8.8□□□□□ -1
APTX-213ENST00000465003 SLC17A3O00476 420 aa8.8□□□□□ -1
APTX-213ENST00000465003 HMGB3O15347 200 aaKnown RBP8.8□□□□□ -1
APTX-213ENST00000465003 GALR1P47211 349 aa8.8□□□□□ -1
APTX-213ENST00000465003 RAB2AP61019 212 aa8.8□□□□□ -1
APTX-213ENST00000465003 C1orf194Q5T5A4 169 aa8.8□□□□□ -1
APTX-213ENST00000465003 C20orf173Q96LM9 149 aa8.8□□□□□ -1
APTX-213ENST00000465003 RETNQ9HD89 108 aa8.8□□□□□ -1
APTX-213ENST00000465003 ELOA3CA0A087WX78 387 aaPredicted RBP8.79□□□□□ -1
APTX-213ENST00000465003 F6UB75 175 aa8.79□□□□□ -1
APTX-213ENST00000465003 SOCS3O14543 225 aa8.79□□□□□ -1
APTX-213ENST00000465003 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
APTX-213ENST00000465003 ZNF266Q14584 549 aa8.79□□□□□ -1
APTX-213ENST00000465003 GDF5OSQ5U4N7 250 aa8.79□□□□□ -1
APTX-213ENST00000465003 OR1L4Q8NGR5 311 aa8.79□□□□□ -1
APTX-213ENST00000465003 C14orf144Q96I85 54 aa8.79□□□□□ -1
APTX-213ENST00000465003 TMPRSS5Q9H3S3 457 aa8.79□□□□□ -1
APTX-213ENST00000465003 PRSS47A8MTI9 375 aa8.79□□□□□ -1
APTX-213ENST00000465003 H3BQ15 152 aa8.79□□□□□ -1
APTX-213ENST00000465003 MBP02144 154 aa8.79□□□□□ -1
APTX-213ENST00000465003 CD5P06127 495 aa8.79□□□□□ -1
APTX-213ENST00000465003 OR10J4P0C629 311 aa8.79□□□□□ -1
APTX-213ENST00000465003 ACTL10Q5JWF8 245 aa8.79□□□□□ -1
APTX-213ENST00000465003 C16orf92Q96LL3 132 aa8.79□□□□□ -1
APTX-213ENST00000465003 SLC25A2Q9BXI2 301 aa8.79□□□□□ -1
APTX-213ENST00000465003 CYTL1Q9NRR1 136 aa8.79□□□□□ -1
APTX-213ENST00000465003 HUWE1Q7Z6Z7 4374 aaKnown RBP8.78□□□□□ -1
APTX-213ENST00000465003 TCAPO15273 167 aa8.78□□□□□ -1
APTX-213ENST00000465003 IGKV3-20P01619 116 aa8.78□□□□□ -1
APTX-213ENST00000465003 ZNF705DP0CH99 300 aaPredicted RBP8.78□□□□□ -1
APTX-213ENST00000465003 ZNF705BP0CI00 300 aaPredicted RBP8.78□□□□□ -1
APTX-213ENST00000465003 RPL7P18124 248 aaKnown RBP8.78□□□□□ -1
APTX-213ENST00000465003 GATAD1Q8WUU5 269 aa8.78□□□□□ -1
APTX-213ENST00000465003 TENM3Q9P273 2699 aa8.78□□□□□ -1
APTX-213ENST00000465003 TRAV8-2A0A0B4J237 113 aa8.77□□□□□ -1
APTX-213ENST00000465003 HAGHQ16775 308 aa8.77□□□□□ -1
APTX-213ENST00000465003 KCNRGQ8N5I3 272 aa8.77□□□□□ -1
APTX-213ENST00000465003 BLNKQ8WV28 456 aa8.77□□□□□ -1
APTX-213ENST00000465003 B9D2Q9BPU9 175 aa8.77□□□□□ -1
APTX-213ENST00000465003 FAM110AQ9BQ89 295 aa8.77□□□□□ -1
APTX-213ENST00000465003 SNRPD3P62318 126 aaKnown RBP8.77□□□□□ -1.01
APTX-213ENST00000465003 BPIFA4PQ86YQ2 179 aa8.77□□□□□ -1.01
APTX-213ENST00000465003 PCNPQ8WW12 178 aaKnown RBP8.77□□□□□ -1.01
APTX-213ENST00000465003 FAM167A-AS1Q96KT0 104 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms