RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 HOXB5P09067 269 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 INAFM2P0DMQ5 153 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 AKR1C1Q04828 323 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 PPP1R1AQ13522 171 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 PYDC2Q56P42 97 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 OR8A1Q8NGG7 326 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 TRIM63Q969Q1 353 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 SLC25A21Q9BQT8 299 aaPredicted RBP10.11□□□□□ -0.79
MCF2L-220ENST00000464800 PTTG2Q9NZH5 202 aa10.11□□□□□ -0.79
MCF2L-220ENST00000464800 MRPS16Q9Y3D3 137 aaKnown RBP10.11□□□□□ -0.79
MCF2L-220ENST00000464800 H3BP45 60 aa10.1□□□□□ -0.79
MCF2L-220ENST00000464800 ZNF701M0R085 212 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-220ENST00000464800 SFT2D2O95562 160 aa10.1□□□□□ -0.79
MCF2L-220ENST00000464800 RPL7P18124 248 aaKnown RBP10.1□□□□□ -0.79
MCF2L-220ENST00000464800 CDKN1BP46527 198 aa10.1□□□□□ -0.79
MCF2L-220ENST00000464800 ESRGQ1W209 222 aa10.1□□□□□ -0.79
MCF2L-220ENST00000464800 ZNF586Q9NXT0 402 aa10.1□□□□□ -0.79
MCF2L-220ENST00000464800 STRAPQ9Y3F4 350 aaKnown RBP10.1□□□□□ -0.79
MCF2L-220ENST00000464800 H7BYZ3 331 aa10.09□□□□□ -0.79
MCF2L-220ENST00000464800 NOL3O60936 208 aaKnown RBP10.09□□□□□ -0.79
MCF2L-220ENST00000464800 CXCL3P19876 107 aa10.09□□□□□ -0.79
MCF2L-220ENST00000464800 LINC00315P59091 139 aa10.09□□□□□ -0.79
MCF2L-220ENST00000464800 RAP2BP61225 183 aa10.09□□□□□ -0.79
MCF2L-220ENST00000464800 ACOT7LQ6ZUV0 252 aa10.09□□□□□ -0.79
MCF2L-220ENST00000464800 LINC00612Q8N6U2 182 aa10.09□□□□□ -0.79
MCF2L-220ENST00000464800 SHANK2-AS3Q9BTD1 123 aa10.09□□□□□ -0.79
MCF2L-220ENST00000464800 HIGD1AQ9Y241 93 aa10.09□□□□□ -0.79
MCF2L-220ENST00000464800 SMCO3A2RU48 225 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 H3BNG1 76 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 RLN2P04090 185 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 IL5P05113 134 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 HOXA5P20719 270 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 PSG3Q16557 428 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 CYP2G1PQ6ZSU1 146 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 LRRC20Q8TCA0 184 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 C20orf144Q9BQM9 153 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 V9GYH0 126 aa10.08□□□□□ -0.8
MCF2L-220ENST00000464800 HERC1Q15751 4861 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 A0A087X0K7 114 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 GAGE12BA1L429 117 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 EREGO14944 169 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 HYPMO75409 117 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 GAGE7O76087 117 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 GAGE12FP0CL80 117 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 GAGE12GP0CL81 117 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 ID3Q02535 119 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 Q5VSD8 79 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 CCDC28AQ8IWP9 274 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 LYPD1Q8N2G4 141 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 DEDD2Q8WXF8 326 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 RPUSD4Q96CM3 377 aaKnown RBP10.07□□□□□ -0.8
MCF2L-220ENST00000464800 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
MCF2L-220ENST00000464800 DNAH5Q8TE73 4624 aa10.06□□□□□ -0.8
MCF2L-220ENST00000464800 SNURFLB1AK76 121 aa10.06□□□□□ -0.8
MCF2L-220ENST00000464800 OR5G3P0C626 314 aa10.06□□□□□ -0.8
MCF2L-220ENST00000464800 LINC00869P0C866 280 aa10.06□□□□□ -0.8
MCF2L-220ENST00000464800 PRB4P10163 310 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-220ENST00000464800 POLR2GP62487 172 aaKnown RBP eCLIP10.06□□□□□ -0.8
MCF2L-220ENST00000464800 CDPF1Q6NVV7 123 aa10.06□□□□□ -0.8
MCF2L-220ENST00000464800 Q6ZRN7 208 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-220ENST00000464800 FRZBQ92765 325 aa10.06□□□□□ -0.8
MCF2L-220ENST00000464800 PSENENQ9NZ42 101 aa10.06□□□□□ -0.8
MCF2L-220ENST00000464800 PLP1P60201 277 aa10.05□□□□□ -0.8
MCF2L-220ENST00000464800 ERVFC1-1P60608 527 aa10.05□□□□□ -0.8
MCF2L-220ENST00000464800 SELENOTP62341 195 aa10.05□□□□□ -0.8
MCF2L-220ENST00000464800 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
MCF2L-220ENST00000464800 TMPRSS5Q9H3S3 457 aa10.05□□□□□ -0.8
MCF2L-220ENST00000464800 C9orf170A2RU37 121 aa10.04□□□□□ -0.8
MCF2L-220ENST00000464800 PMS2P5A8MQ11 134 aa10.04□□□□□ -0.8
MCF2L-220ENST00000464800 SSSCA1O60232 199 aa10.04□□□□□ -0.8
MCF2L-220ENST00000464800 CXCL2P19875 107 aa10.04□□□□□ -0.8
MCF2L-220ENST00000464800 S100A5P33763 92 aa10.04□□□□□ -0.8
MCF2L-220ENST00000464800 FUSP35637 526 aaKnown RBP eCLIP10.04□□□□□ -0.8
MCF2L-220ENST00000464800 XGP55808 180 aa10.04□□□□□ -0.8
MCF2L-220ENST00000464800 UBE2MP61081 183 aaKnown RBP10.04□□□□□ -0.8
MCF2L-220ENST00000464800 RRAS2P62070 204 aaPredicted RBP10.04□□□□□ -0.8
MCF2L-220ENST00000464800 KIR3DS1Q14943 382 aa10.04□□□□□ -0.8
MCF2L-220ENST00000464800 GFI1BQ5VTD9 330 aa10.04□□□□□ -0.8
MCF2L-220ENST00000464800 SMIM8Q96KF7 97 aa10.04□□□□□ -0.8
MCF2L-220ENST00000464800 SIVA1O15304 175 aa10.03□□□□□ -0.8
MCF2L-220ENST00000464800 CCNKO75909 580 aa10.03□□□□□ -0.8
MCF2L-220ENST00000464800 LCN15Q6UWW0 184 aa10.03□□□□□ -0.8
MCF2L-220ENST00000464800 PATE2Q6UY27 113 aa10.03□□□□□ -0.8
MCF2L-220ENST00000464800 CCDC190Q86UF4 302 aa10.03□□□□□ -0.8
MCF2L-220ENST00000464800 SLC50A1Q9BRV3 221 aa10.03□□□□□ -0.8
MCF2L-220ENST00000464800 PARD6GQ9BYG4 376 aaPredicted RBP10.03□□□□□ -0.8
MCF2L-220ENST00000464800 ARL6Q9H0F7 186 aa10.03□□□□□ -0.8
MCF2L-220ENST00000464800 NPVFQ9HCQ7 196 aa10.03□□□□□ -0.8
MCF2L-220ENST00000464800 RNF24Q9Y225 148 aa10.03□□□□□ -0.8
MCF2L-220ENST00000464800 A0A096LPF7 62 aa10.02□□□□□ -0.81
MCF2L-220ENST00000464800 ANXA7P20073 488 aaKnown RBP10.02□□□□□ -0.81
MCF2L-220ENST00000464800 TMEM14EPQ6UXP3 125 aa10.02□□□□□ -0.81
MCF2L-220ENST00000464800 ARV1Q9H2C2 271 aa10.02□□□□□ -0.81
MCF2L-220ENST00000464800 ZNF331Q9NQX6 463 aaPredicted RBP10.02□□□□□ -0.81
MCF2L-220ENST00000464800 K7EPK0 472 aa10.01□□□□□ -0.81
MCF2L-220ENST00000464800 MRPS12O15235 138 aaKnown RBP10.01□□□□□ -0.81
MCF2L-220ENST00000464800 NDUFB6O95139 128 aa10.01□□□□□ -0.81
MCF2L-220ENST00000464800 IFNA5P01569 189 aa10.01□□□□□ -0.81
MCF2L-220ENST00000464800 METTL15P1P0C7V9 234 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms