RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TCTEX1D4Q5JR98 221 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 ZNF474Q6S9Z5 364 aaPredicted RBP5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 FOXI2Q6ZQN5 318 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 DEFB123Q8N688 67 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 NUP37Q8NFH4 326 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 ATP6V0E2Q8NHE4 81 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 ATP6V0BQ99437 205 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 CCL13Q99616 98 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 SPANXA1Q9NS26 97 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 CHD9Q3L8U1 2897 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 DNAJC13O75165 2243 aa5.71□□□□□ -1.5
CLSTN1-204ENST00000464286 ZFHX4Q86UP3 3567 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 MBD3L4A6NDZ8 208 aaPredicted RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 MBD3L3A6NE82 208 aaPredicted RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 LINC01549A6NIU2 74 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 MBD3L5A6NJ08 208 aaPredicted RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 NCBP2LA6PVI3 153 aaKnown RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 D6R8Y8 96 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 K7EMI3 77 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 SAP30O75446 220 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 IGHV1-46P01743 117 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 IGKCP01834 107 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 ARMS2P0C7Q2 107 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 GCSHP23434 173 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 PLNP26678 52 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 IFI27P40305 119 aaPredicted RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 RAB9AP51151 201 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 KLF17Q5JT82 389 aaPredicted RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 VHLLQ6RSH7 139 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 LINC00322Q6ZN03 302 aaPredicted RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 BCL6BQ8N143 479 aaPredicted RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 TTC9CQ8N5M4 171 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 C9orf106Q8NAJ2 232 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 MBD3L2Q8NHZ7 208 aaPredicted RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 RND1Q92730 232 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 ZC2HC1AQ96GY0 325 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 ZNF48Q96MX3 618 aaPredicted RBP5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 CHAC1Q9BUX1 264 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 FSCN3Q9NQT6 498 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 PLA2G2DQ9UNK4 145 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 CHD7Q9P2D1 2997 aa5.7□□□□□ -1.5
CLSTN1-204ENST00000464286 PPIAL4EA0A075B759 164 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 PPIAL4CA0A0B4J2A2 164 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 GAGE12HA6NDE8 117 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 H3BRN7 92 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 ENSAO43768 121 aaKnown RBP5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 NDUFS7O75251 213 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 PLAUP00749 431 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 IGLV2-23P01705 113 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 IGLV2-11P01706 119 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 RBP4P02753 201 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 PRSS1P07477 247 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 PPIAL4FP0DN26 164 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 PPIAL4GP0DN37 164 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 RPL7P18124 248 aaKnown RBP5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 ZNF138P52744 262 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 HOXA4Q00056 320 aaPredicted RBP5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 CLEC2AQ6UVW9 174 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 ZNF562Q6V9R5 426 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 LHFPL4Q7Z7J7 247 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 CEND1Q8N111 149 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 FAM216BQ8N7L0 139 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 DEFB108BQ8NET1 73 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 MYOZ3Q8TDC0 251 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 RAB37Q96AX2 223 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 SPATA25Q9BR10 227 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 ZMAT4Q9H898 229 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 ATRXP46100 2492 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 EYSQ5T1H1 3165 aa5.69□□□□□ -1.5
CLSTN1-204ENST00000464286 COL27A1Q8IZC6 1860 aaPredicted RBP5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 A0A1W2PRD5 423 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 A0A1W2PRF3 423 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 A0A1W2PRM7 423 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 E9PLD3 99 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 AZU1P20160 251 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 SSBP2P81877 361 aaPredicted RBP5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 SCGB2A2Q13296 93 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 MRPL51Q4U2R6 128 aaKnown RBP5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 GAGE13Q4V321 117 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 LCE5AQ5TCM9 118 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 LYZL1Q6UWQ5 148 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 IGFL2Q6UWQ7 119 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 TMEM108Q6UXF1 575 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 SIGLEC15Q6ZMC9 328 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 Q8N8P6 123 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 LINC01356Q8N9X3 169 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 MRAP2Q96G30 205 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 ZNF479Q96JC4 524 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 TPPP3Q9BW30 176 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 KAAG1Q9UBP8 84 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 HILPDAQ9Y5L2 63 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 DOCK7Q96N67 2140 aa5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 HEATR1Q9H583 2144 aaKnown RBP5.68□□□□□ -1.5
CLSTN1-204ENST00000464286 LOC389332A0A1B0GUA5 103 aa5.67□□□□□ -1.5
CLSTN1-204ENST00000464286 CGB1A6NKQ9 187 aa5.67□□□□□ -1.5
CLSTN1-204ENST00000464286 SH2D1AO60880 128 aa5.67□□□□□ -1.5
CLSTN1-204ENST00000464286 CRYGBP07316 175 aa5.67□□□□□ -1.5
CLSTN1-204ENST00000464286 C1orf185Q5T7R7 199 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms