RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 IGF2BP2-AS1Q96M15 143 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 MRPL32Q9BYC8 188 aaKnown RBP2.88□□□□□ -1.95
COL8A1-205ENST00000463753 CALYQ9NYX4 217 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 LSM7Q9UK45 103 aaKnown RBP2.88□□□□□ -1.95
COL8A1-205ENST00000463753 V9GYY9 64 aa2.88□□□□□ -1.95
COL8A1-205ENST00000463753 MYO7BQ6PIF6 2116 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 EXPH5Q8NEV8 1989 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 SPEGQ15772 3267 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 CNTRLQ7Z7A1 2325 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 TANC2Q9HCD6 1990 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 TRGV11A0A075B6L2 103 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 A0A1B0GXF2 115 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 SYNGR3O43761 229 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 TCL1BO95988 128 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 CELA2AP08217 269 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 ASIPP42127 132 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 PMVKQ15126 192 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 ATP5L2Q7Z4Y8 100 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 TMEM219Q86XT9 240 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 MAPKAPK5-AS1Q8N8E1 139 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 NTN5Q8WTR8 489 aaPredicted RBP2.87□□□□□ -1.95
COL8A1-205ENST00000463753 BAALCQ8WXS3 180 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 HIGD1BQ9P298 99 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 KLF13Q9Y2Y9 288 aaPredicted RBP2.87□□□□□ -1.95
COL8A1-205ENST00000463753 LAMA2P24043 3122 aaKnown RBP2.87□□□□□ -1.95
COL8A1-205ENST00000463753 A0A0U1RQV1 116 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 MS4A18H0YCH9 400 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 RS1O15537 224 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 FOXS1O43638 330 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 P01737 135 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 PRB4P10163 310 aaPredicted RBP2.87□□□□□ -1.95
COL8A1-205ENST00000463753 DEFB110Q30KQ9 67 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 MS4A18Q3C1V0 323 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 SPRNQ5BIV9 151 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 CEMP1Q6PRD7 247 aaPredicted RBP2.87□□□□□ -1.95
COL8A1-205ENST00000463753 MOB3BQ86TA1 216 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 SFTPA2Q8IWL1 248 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 SFTPA1Q8IWL2 248 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 RPRMLQ8N4K4 120 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 C3orf22Q8N5N4 141 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 RNF152Q8N8N0 203 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 MMABQ96EY8 250 aaPredicted RBP2.87□□□□□ -1.95
COL8A1-205ENST00000463753 ODF3Q96PU9 254 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 DSCR8Q96T75 97 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 AAMDCQ9H7C9 122 aa2.87□□□□□ -1.95
COL8A1-205ENST00000463753 DIDO1Q9BTC0 2240 aaKnown RBP2.87□□□□□ -1.95
COL8A1-205ENST00000463753 PIGBOS1A0A0B4J2F0 54 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 TEX49A0A1B0GTD5 131 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 NPIPB11E5RHQ5 1161 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 H7C2G1 150 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 SLC25A20O43772 301 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 HLA-DRB4P13762 266 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 CCL1P22362 96 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 UBE2L3P68036 154 aaKnown RBP2.86□□□□□ -1.95
COL8A1-205ENST00000463753 Q6Q795 121 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 IL17RELQ6ZVW7 336 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 MKXQ8IYA7 352 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 ZNF441Q8N8Z8 693 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 NABP1Q96AH0 204 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 ZNF503Q96F45 646 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 TMEM167BQ9NRX6 74 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 PRNDQ9UKY0 176 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 AMMECR1Q9Y4X0 333 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-205ENST00000463753 HLA-DRB4X5D2U9 266 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 SPTBN4Q9H254 2564 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 A0A096LNJ9 63 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 TRAV41A0A0B4J266 112 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 FAM236DA0A1B0GTK5 79 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 A0A1B0GX51 115 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 M0R135 149 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 MPDU1O75352 247 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 HBDP02042 147 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 FAM236CP0DP71 79 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 HMGA1P17096 107 aaKnown RBP2.86□□□□□ -1.95
COL8A1-205ENST00000463753 LINC00205P59089 165 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 SRYQ05066 204 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 ZNF672Q499Z4 452 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-205ENST00000463753 ZNF799Q96GE5 643 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 RPP21Q9H633 154 aaKnown RBP2.86□□□□□ -1.95
COL8A1-205ENST00000463753 FGF22Q9HCT0 170 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 LINC00527Q9UJ94 153 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 PILRAQ9UKJ1 303 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 ZNF256Q9Y2P7 627 aaPredicted RBP2.86□□□□□ -1.95
COL8A1-205ENST00000463753 MYO15AQ9UKN7 3530 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 VPS13AQ96RL7 3174 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 MYO7AQ13402 2215 aa2.86□□□□□ -1.95
COL8A1-205ENST00000463753 MYMXA0A1B0GTQ4 84 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 hADV29S1A0JD25 119 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 D6R8Y8 96 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 H0YGG7 62 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 ZNHIT1O43257 154 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 NDUFS7O75251 213 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 IGKCP01834 107 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 MYCNOSP40205 109 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 CRIP2P52943 208 aaPredicted RBP2.85□□□□□ -1.95
COL8A1-205ENST00000463753 HERVK_113P61574 105 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 FAM27E3Q08E93 113 aa2.85□□□□□ -1.95
COL8A1-205ENST00000463753 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms