RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 SHANK2-AS3Q9BTD1 123 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 LYPD1Q8N2G4 141 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 CFPP27918 469 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 DPM2O94777 84 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 NCR2O95944 276 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 LINC00158P58513 81 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 LAGE3Q14657 143 aa10.3□□□□□ -0.76
NUP58-206ENST00000463407 PHF3Q92576 2039 aaKnown RBP10.29□□□□□ -0.76
NUP58-206ENST00000463407 PLXND1Q9Y4D7 1925 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 A0A1B0GW64 132 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 K7ERU9 68 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 APOMO95445 188 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 CHCHD1Q96BP2 118 aaKnown RBP10.29□□□□□ -0.76
NUP58-206ENST00000463407 A0A0U1RRA0 63 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 MRAPQ8TCY5 172 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 PHLDA1Q8WV24 401 aaPredicted RBP10.29□□□□□ -0.76
NUP58-206ENST00000463407 NOTCH4Q99466 2003 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 FNDC10F2Z333 226 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 PARD6GQ9BYG4 376 aaPredicted RBP10.29□□□□□ -0.76
NUP58-206ENST00000463407 ADORA2A-AS1P86434 159 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 NRGNQ92686 78 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 A0A087WWL8 130 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.29□□□□□ -0.76
NUP58-206ENST00000463407 NCOR1P1Q9H4R4 102 aa10.29□□□□□ -0.76
NUP58-206ENST00000463407 D6R8Y8 96 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 DKK1O94907 266 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 C14orf178Q8N769 122 aaPredicted RBP10.28□□□□□ -0.76
NUP58-206ENST00000463407 RSPO3Q9BXY4 272 aaPredicted RBP10.28□□□□□ -0.76
NUP58-206ENST00000463407 ZMAT4Q9H898 229 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 LSM4Q9Y4Z0 139 aaKnown RBP10.28□□□□□ -0.76
NUP58-206ENST00000463407 IGHV4-30-2A0A087WSY4 118 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 IGHV4-59P01825 116 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 AMBPP02760 352 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 NDUFA4L2Q9NRX3 87 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 TMEM14BQ9NUH8 114 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 CEP250Q9BV73 2442 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 YLPM1P49750 1951 aaKnown RBP10.28□□□□□ -0.76
NUP58-206ENST00000463407 IGKCP01834 107 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 LYL1P12980 280 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 LINC00311Q8N616 119 aa10.28□□□□□ -0.76
NUP58-206ENST00000463407 TRAV8-1A0A0A6YYK1 113 aa10.27□□□□□ -0.76
NUP58-206ENST00000463407 IGHV2-70P01814 119 aa10.27□□□□□ -0.76
NUP58-206ENST00000463407 VPREB3Q9UKI3 123 aa10.27□□□□□ -0.76
NUP58-206ENST00000463407 FOXL1Q12952 345 aa10.27□□□□□ -0.77
NUP58-206ENST00000463407 LINC01551Q86U37 167 aa10.27□□□□□ -0.77
NUP58-206ENST00000463407 VOPP1Q96AW1 172 aa10.27□□□□□ -0.77
NUP58-206ENST00000463407 TSSC4Q9Y5U2 329 aaPredicted RBP10.27□□□□□ -0.77
NUP58-206ENST00000463407 KIF26AQ9ULI4 1882 aaPredicted RBP10.27□□□□□ -0.77
NUP58-206ENST00000463407 TMEM242Q9NWH2 141 aa10.27□□□□□ -0.77
NUP58-206ENST00000463407 TDGF1P3P51864 188 aa10.27□□□□□ -0.77
NUP58-206ENST00000463407 DIAPH2-AS1Q14236 149 aa10.27□□□□□ -0.77
NUP58-206ENST00000463407 S100A7L2Q5SY68 101 aa10.27□□□□□ -0.77
NUP58-206ENST00000463407 TMEM86BQ8N661 226 aa10.27□□□□□ -0.77
NUP58-206ENST00000463407 TRAV2A0A0B4J234 112 aa10.26□□□□□ -0.77
NUP58-206ENST00000463407 IGHV4-61A0A0C4DH41 118 aa10.26□□□□□ -0.77
NUP58-206ENST00000463407 KLK9Q9UKQ9 250 aa10.26□□□□□ -0.77
NUP58-206ENST00000463407 TP53BP1Q12888 1972 aaPredicted RBP10.26□□□□□ -0.77
NUP58-206ENST00000463407 NDUFA4O00483 81 aa10.26□□□□□ -0.77
NUP58-206ENST00000463407 MMP23AO75900 390 aa10.26□□□□□ -0.77
NUP58-206ENST00000463407 YPEL3P61236 119 aaPredicted RBP10.26□□□□□ -0.77
NUP58-206ENST00000463407 CXCL1P09341 107 aa10.26□□□□□ -0.77
NUP58-206ENST00000463407 TPSG1Q9NRR2 321 aa10.26□□□□□ -0.77
NUP58-206ENST00000463407 C22orf46C9J442 243 aa10.26□□□□□ -0.77
NUP58-206ENST00000463407 RSPO1Q2MKA7 263 aaPredicted RBP10.26□□□□□ -0.77
NUP58-206ENST00000463407 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
NUP58-206ENST00000463407 ELANEP08246 267 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 NUP35Q8NFH5 326 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 VCYO14598 125 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 TEX43Q6ZNM6 134 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 KNCNA6PVL3 124 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST1H2BKO60814 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST1H2BJP06899 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST1H2BOP23527 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST1H2BBP33778 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST1H2BDP58876 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST1H2BCP62807 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST2H2BEQ16778 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 CD300EQ496F6 205 aaPredicted RBP10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST1H2BHQ93079 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 C1orf159Q96HA4 380 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST1H2BNQ99877 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 HIST1H2BMQ99879 126 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 KAAG1Q9UBP8 84 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 RIF1Q5UIP0 2472 aaKnown RBP10.25□□□□□ -0.77
NUP58-206ENST00000463407 DIDO1Q9BTC0 2240 aaKnown RBP10.25□□□□□ -0.77
NUP58-206ENST00000463407 SPOCK3Q9BQ16 436 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 C15orf65H3BRN8 121 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 Q86TA4 180 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 IFI27L1Q96BM0 104 aa10.25□□□□□ -0.77
NUP58-206ENST00000463407 C1orf147Q96MC9 270 aaPredicted RBP10.24□□□□□ -0.77
NUP58-206ENST00000463407 PDE6HQ13956 83 aa10.24□□□□□ -0.77
NUP58-206ENST00000463407 SS18Q15532 418 aa10.24□□□□□ -0.77
NUP58-206ENST00000463407 ANAPC10Q9UM13 185 aa10.24□□□□□ -0.77
NUP58-206ENST00000463407 A0A1W2PNU3 283 aaPredicted RBP10.24□□□□□ -0.77
NUP58-206ENST00000463407 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
NUP58-206ENST00000463407 LY96Q9Y6Y9 160 aa10.24□□□□□ -0.77
NUP58-206ENST00000463407 IGHV3-16A0A0C4DH30 117 aa10.24□□□□□ -0.77
NUP58-206ENST00000463407 AZU1P20160 251 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms