RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PRNTQ86SH4 94 aa7.87□□□□□ -1.15
MSH5-211ENST00000463144 CIARTQ8N365 385 aaPredicted RBP7.87□□□□□ -1.15
MSH5-211ENST00000463144 EEF1AKMT3Q96AZ1 226 aa7.87□□□□□ -1.15
MSH5-211ENST00000463144 CENPEQ02224 2701 aa7.87□□□□□ -1.15
MSH5-211ENST00000463144 POLQO75417 2590 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 TRBV7-1A0A0A6YYK4 115 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 TRBV6-1A0A0K0K1D8 114 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 SNURFLB1AK76 121 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 DIRC3C9JPN6 131 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 SCGB2A1O75556 95 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 PPIFP30405 207 aaKnown RBP7.86□□□□□ -1.15
MSH5-211ENST00000463144 PDE6HQ13956 83 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 MRPL54Q6P161 138 aaKnown RBP7.86□□□□□ -1.15
MSH5-211ENST00000463144 NUP35Q8NFH5 326 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 NOL4LQ96MY1 436 aaPredicted RBP7.86□□□□□ -1.15
MSH5-211ENST00000463144 ZNF492Q9P255 531 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 BMPR1BO00238 502 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 NUPR1O60356 82 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 AMBPP02760 352 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 RPL7P18124 248 aaKnown RBP7.86□□□□□ -1.15
MSH5-211ENST00000463144 ATP5G2Q06055 141 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 TMEM256Q8N2U0 113 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 GNB4Q9HAV0 340 aa7.86□□□□□ -1.15
MSH5-211ENST00000463144 GRIFINA4D1Z8 144 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 BUB3O43684 328 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 IGHG4P01861 327 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 APOHP02749 345 aaPredicted RBP7.85□□□□□ -1.15
MSH5-211ENST00000463144 PSG3Q16557 428 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 IGFL4Q6B9Z1 124 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 CDPF1Q6NVV7 123 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 TMEM75Q8N9X5 138 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 TSKUQ8WUA8 353 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 NEU1Q99519 415 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 NIT2Q9NQR4 276 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 TP53TG3Q9ULZ0 132 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 PSG8Q9UQ74 426 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 CR1P17927 2039 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 ZANQ9Y493 2812 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 TGFAP01135 160 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 TRGV3P03979 118 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 HLA-DMBP28068 263 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 DEFB112Q30KQ8 113 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 GDF5OSQ5U4N7 250 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 TMEM190Q8WZ59 177 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 ZC2HC1AQ96GY0 325 aa7.85□□□□□ -1.15
MSH5-211ENST00000463144 PACRGQ96M98 296 aaPredicted RBP7.85□□□□□ -1.15
MSH5-211ENST00000463144 RPP21Q9H633 154 aaKnown RBP7.85□□□□□ -1.15
MSH5-211ENST00000463144 FAM223BA6NKX1 122 aa7.84□□□□□ -1.15
MSH5-211ENST00000463144 NPIPB6E9PJ23 425 aa7.84□□□□□ -1.15
MSH5-211ENST00000463144 LOXL1Q08397 574 aaPredicted RBP7.84□□□□□ -1.15
MSH5-211ENST00000463144 TCF24Q7RTU0 167 aa7.84□□□□□ -1.15
MSH5-211ENST00000463144 FAM223AQ8IWN6 122 aa7.84□□□□□ -1.15
MSH5-211ENST00000463144 GTSF1Q8WW33 167 aa7.84□□□□□ -1.15
MSH5-211ENST00000463144 KLK15Q9H2R5 256 aa7.84□□□□□ -1.15
MSH5-211ENST00000463144 AAMDCQ9H7C9 122 aa7.84□□□□□ -1.15
MSH5-211ENST00000463144 NAT8BQ9UHF3 227 aa7.84□□□□□ -1.15
MSH5-211ENST00000463144 IGHV3-66A0A0C4DH42 116 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 HIGD1CA8MV81 97 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 ZNF207O43670 478 aaKnown RBP7.83□□□□□ -1.16
MSH5-211ENST00000463144 TRBV12-3P01733 135 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 P01737 135 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 CRIP1P50238 77 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 LINC00310P59036 64 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 PSG9Q00887 426 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 DEFB113Q30KQ7 82 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 KIAA1644Q3SXP7 199 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 WDR73Q6P4I2 378 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 C16orf54Q6UWD8 224 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 GBGT1Q8N5D6 347 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 GCN1Q92616 2671 aaKnown RBP7.83□□□□□ -1.16
MSH5-211ENST00000463144 IGHV3OR16-13A0A075B7E8 117 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 IGHV3-74A0A0B4J1X5 117 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 F2Z2F3 143 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 J3QLI3 93 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 M0QZK8 103 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 BRI3O95415 125 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 IGHV4-59P01825 116 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 MT-ND6P03923 174 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 IGHV4-31P0DP07 118 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 TPPP2P59282 170 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 RPL19P84098 196 aaKnown RBP7.83□□□□□ -1.16
MSH5-211ENST00000463144 WIPF2Q8TF74 440 aaPredicted RBP7.83□□□□□ -1.16
MSH5-211ENST00000463144 C8orf49Q96NF6 230 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 ATP6V0BQ99437 205 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 ZNF331Q9NQX6 463 aaPredicted RBP7.83□□□□□ -1.16
MSH5-211ENST00000463144 ZFP30Q9Y2G7 519 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 U3KQE9 123 aa7.83□□□□□ -1.16
MSH5-211ENST00000463144 USP9YO00507 2555 aaPredicted RBP7.83□□□□□ -1.16
MSH5-211ENST00000463144 CSPG4Q6UVK1 2322 aa7.82□□□□□ -1.16
MSH5-211ENST00000463144 IGKV2-40A0A087WW87 121 aaPredicted RBP7.82□□□□□ -1.16
MSH5-211ENST00000463144 IGHV3-49A0A0A0MS15 119 aa7.82□□□□□ -1.16
MSH5-211ENST00000463144 K7EQM0 130 aa7.82□□□□□ -1.16
MSH5-211ENST00000463144 IGKV2D-40P01614 121 aaPredicted RBP7.82□□□□□ -1.16
MSH5-211ENST00000463144 CRISP2P16562 243 aa7.82□□□□□ -1.16
MSH5-211ENST00000463144 RAB4BP61018 213 aa7.82□□□□□ -1.16
MSH5-211ENST00000463144 COX19Q49B96 90 aa7.82□□□□□ -1.16
MSH5-211ENST00000463144 CT83Q5H943 113 aa7.82□□□□□ -1.16
MSH5-211ENST00000463144 BEX4Q9NWD9 120 aaPredicted RBP7.82□□□□□ -1.16
MSH5-211ENST00000463144 PTPN13Q12923 2485 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms