RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 HTN1P15515 57 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 ZNF182P17025 639 aaPredicted RBP5.15□□□□□ -1.59
SMC3-202ENST00000462899 HIST1H1AQ02539 215 aaPredicted RBP5.15□□□□□ -1.59
SMC3-202ENST00000462899 OR2F1Q13607 317 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 MEF2DQ14814 521 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 CT83Q5H943 113 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 GFI1BQ5VTD9 330 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 TMEM182Q6ZP80 229 aaPredicted RBP5.15□□□□□ -1.59
SMC3-202ENST00000462899 CROCCP3Q8IVE0 287 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 LGI3Q8N145 548 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 CCDC71LQ8N9Z2 235 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 C11orf72Q8NBR9 251 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 OR4D10Q8NGI6 311 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 OR13C8Q8NGS7 320 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 GPR82Q96P67 336 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 SLC25A22Q9H936 323 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 TMEM56-RWDD3S4R434 201 aa5.15□□□□□ -1.59
SMC3-202ENST00000462899 TEX13DA0A0J9YY54 714 aaPredicted RBP5.14□□□□□ -1.59
SMC3-202ENST00000462899 LOC100506127A0A0U1RQW1 187 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 MRPS12O15235 138 aaKnown RBP5.14□□□□□ -1.59
SMC3-202ENST00000462899 ZNF324O75467 553 aaPredicted RBP5.14□□□□□ -1.59
SMC3-202ENST00000462899 CFDP00746 253 aaPredicted RBP5.14□□□□□ -1.59
SMC3-202ENST00000462899 FABP1P07148 127 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 ATP5IP56385 69 aaPredicted RBP5.14□□□□□ -1.59
SMC3-202ENST00000462899 LYPD5Q6UWN5 251 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 WFDC10BQ8IUB3 73 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 Q8N814 137 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 ZNF738Q8NE65 137 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 RNASE11Q8TAA1 199 aaKnown RBP5.14□□□□□ -1.59
SMC3-202ENST00000462899 DTD1Q8TEA8 209 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 PPP1R14BQ96C90 147 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 SLC35E1Q96K37 410 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 CNBD2Q96M20 576 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 RTBDNQ9BSG5 229 aaPredicted RBP5.14□□□□□ -1.59
SMC3-202ENST00000462899 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 NAA60Q9H7X0 242 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 COPZ2Q9P299 210 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 CACFD1Q9UGQ2 172 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 LY96Q9Y6Y9 160 aa5.14□□□□□ -1.59
SMC3-202ENST00000462899 CD3DP04234 171 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 SULT1A3P0DMM9 295 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 SULT1A4P0DMN0 295 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 PRB4P10163 310 aaPredicted RBP5.13□□□□□ -1.59
SMC3-202ENST00000462899 TBPP20226 339 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 GATA2P23769 480 aaPredicted RBP5.13□□□□□ -1.59
SMC3-202ENST00000462899 RPS19P39019 145 aaKnown RBP5.13□□□□□ -1.59
SMC3-202ENST00000462899 PSG3Q16557 428 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 TERB2Q8NHR7 220 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 ZFAND1Q8TCF1 268 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 MARCH1Q8TCQ1 289 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 PARD6GQ9BYG4 376 aaPredicted RBP5.13□□□□□ -1.59
SMC3-202ENST00000462899 RBKSQ9H477 322 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 ICOSQ9Y6W8 199 aa5.13□□□□□ -1.59
SMC3-202ENST00000462899 CRYM-AS1A6NIL9 109 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 SNURFLB1AK76 121 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 GABARAPH6UMI1 98 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 SPINK4O60575 86 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 GABARAPO95166 117 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 APOA1P02647 267 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 MT1HL1P0DM35 61 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 RHOBP62745 196 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 RNASE10Q5GAN6 216 aaKnown RBP5.12□□□□□ -1.59
SMC3-202ENST00000462899 GPR107Q5VW38 600 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 TMEM268Q5VZI3 342 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 GGNBP1Q5YKI7 109 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 SNX29P2Q8IUI4 249 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 ZBTB8BQ8NAP8 495 aaPredicted RBP5.12□□□□□ -1.59
SMC3-202ENST00000462899 SHANK2-AS3Q9BTD1 123 aa5.12□□□□□ -1.59
SMC3-202ENST00000462899 TRAV9-2A0A087WT02 112 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 LINC00854A0A1B0GVQ3 168 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 PRAC2D3DTV9 90 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 PITX3O75364 302 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 RPL7P18124 248 aaKnown RBP5.11□□□□□ -1.59
SMC3-202ENST00000462899 CCR6P51684 374 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 CRYBA4P53673 196 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 PLP1P60201 277 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 SMCO1Q147U7 214 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 SURF2Q15527 256 aaPredicted RBP5.11□□□□□ -1.59
SMC3-202ENST00000462899 IZUMO2Q6UXV1 221 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 ACOT7LQ6ZUV0 252 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 SCXQ7RTU7 201 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 CCDC28AQ8IWP9 274 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 ZNF431Q8TF32 576 aaPredicted RBP5.11□□□□□ -1.59
SMC3-202ENST00000462899 RPUSD4Q96CM3 377 aaKnown RBP5.11□□□□□ -1.59
SMC3-202ENST00000462899 ST6GAL2Q96JF0 529 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 ODF3Q96PU9 254 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 PYGO2Q9BRQ0 406 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 MTFP1Q9UDX5 166 aa5.11□□□□□ -1.59
SMC3-202ENST00000462899 TRGV2A0A075B6R0 118 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 A0A0B4J2A0 478 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 CRYGDP07320 174 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 ORM2P19652 201 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 CXCL2P19875 107 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 FGL1Q08830 312 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 FHL2Q14192 279 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 WFDC2Q14508 124 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 C4orf46Q504U0 113 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 NEGR1Q7Z3B1 354 aa5.1□□□□□ -1.59
SMC3-202ENST00000462899 C10orf126Q8N4M7 172 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms