RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 SLC25A39Q9BZJ4 359 aaPredicted RBP4.5□□□□□ -1.69
NUP98-208ENST00000461047 SLC25A32Q9H2D1 315 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 VSIRQ9H7M9 311 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 SLC25A22Q9H936 323 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 WFDC1Q9HC57 220 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 CLEC5AQ9NY25 188 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 DOK5Q9P104 306 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 NF1P21359 2839 aa4.5□□□□□ -1.69
NUP98-208ENST00000461047 IGHV3-49A0A0A0MS15 119 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 TRAV2A0A0B4J234 112 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 ZNF98A6NK75 572 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 BUB3O43684 328 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 IGLV1-51P01701 117 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 SNRPD3P62318 126 aaKnown RBP4.49□□□□□ -1.69
NUP98-208ENST00000461047 USF2Q15853 346 aaPredicted RBP4.49□□□□□ -1.69
NUP98-208ENST00000461047 GUK1Q16774 197 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 KHDC3LQ587J8 217 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 TMEM41BQ5BJD5 291 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 C16orf54Q6UWD8 224 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 C9orf62Q8N4C0 152 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 PHYHIPLQ96FC7 376 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 SPAG8Q99932 426 aaPredicted RBP4.49□□□□□ -1.69
NUP98-208ENST00000461047 FUT9Q9Y231 359 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 ZNF256Q9Y2P7 627 aaPredicted RBP4.49□□□□□ -1.69
NUP98-208ENST00000461047 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
NUP98-208ENST00000461047 IGHV3OR16-13A0A075B7E8 117 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 IGHV3-74A0A0B4J1X5 117 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 IGHV3-66A0A0C4DH42 116 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 H3BRN7 92 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 TSPAN4O14817 238 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 OR7C2O60412 319 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 CXorf1O96002 111 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 SPP1P10451 314 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 GP9P14770 177 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 CDC34P49427 236 aaPredicted RBP4.48□□□□□ -1.69
NUP98-208ENST00000461047 PSG9Q00887 426 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 CD300EQ496F6 205 aaPredicted RBP4.48□□□□□ -1.69
NUP98-208ENST00000461047 FAM74A1Q5RGS3 127 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 FAM122CQ6P4D5 195 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 IL34Q6ZMJ4 242 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 PQLC2Q6ZP29 291 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 TMEM182Q6ZP80 229 aaPredicted RBP4.48□□□□□ -1.69
NUP98-208ENST00000461047 OR51M1Q9H341 326 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 AAMDCQ9H7C9 122 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 SEPSECSQ9HD40 501 aaKnown RBP4.48□□□□□ -1.69
NUP98-208ENST00000461047 NRN1Q9NPD7 142 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 CYTL1Q9NRR1 136 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 TMEM14CQ9P0S9 112 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 MLXQ9UH92 298 aa4.48□□□□□ -1.69
NUP98-208ENST00000461047 ZNF469Q96JG9 3925 aaPredicted RBP4.47□□□□□ -1.69
NUP98-208ENST00000461047 VPS13CQ709C8 3753 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 IGKV3-7A0A075B6H7 116 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 CTXND1A0A1B0GTU2 59 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 ISLRO14498 428 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 IFNA7P01567 189 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 HBE1P02100 147 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 APOHP02749 345 aaPredicted RBP4.47□□□□□ -1.69
NUP98-208ENST00000461047 HIST1H1EP10412 219 aaKnown RBP4.47□□□□□ -1.69
NUP98-208ENST00000461047 GCSHP23434 173 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 PPT1P50897 306 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 CD300CQ08708 224 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 LCN15Q6UWW0 184 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 PATE2Q6UY27 113 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 TMEM61Q8N0U2 210 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 TMEM37Q8WXS4 190 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 UHRF2Q96PU4 802 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 SLC50A1Q9BRV3 221 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 PAXXQ9BUH6 204 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 SCRT1Q9BWW7 348 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 SH3BGRL3Q9H299 93 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 MS4A6AQ9H2W1 248 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 HRH4Q9H3N8 390 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 TMEM167BQ9NRX6 74 aa4.47□□□□□ -1.69
NUP98-208ENST00000461047 COL6A5A8TX70 2615 aa4.46□□□□□ -1.69
NUP98-208ENST00000461047 OR11H12B2RN74 326 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 NBEAP1P0C6P0 100 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 CSN1S1P47710 185 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 TFPI2P48307 235 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 PSMB3P49720 205 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 NKX2-5P52952 324 aaPredicted RBP4.46□□□□□ -1.7
NUP98-208ENST00000461047 RAB14P61106 215 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 UBE2L3P68036 154 aaKnown RBP4.46□□□□□ -1.7
NUP98-208ENST00000461047 PDE6HQ13956 83 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 SPATA31B1PQ5VZV4 182 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 FAM90A2PQ658T7 463 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 LEMD1Q68G75 181 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 EBLN2Q6P2I7 272 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 MIR17HGQ75NE6 70 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 IQCF2Q8IXL9 164 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 LYPD1Q8N2G4 141 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 GBGT1Q8N5D6 347 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 RPP25LQ8N5L8 163 aaKnown RBP4.46□□□□□ -1.7
NUP98-208ENST00000461047 FAM213BQ8TBF2 198 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 SFT2D1Q8WV19 159 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 TMED6Q8WW62 240 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 GLMPQ8WWB7 406 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 RAB24Q969Q5 203 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 LINC00052Q96N35 136 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 FAM110AQ9BQ89 295 aa4.46□□□□□ -1.7
NUP98-208ENST00000461047 NKX6-2Q9C056 277 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms