RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 RABAC1Q9UI14 185 aa6.98□□□□□ -1.29
HDAC3-202ENST00000459727 IGHV3-21A0A0B4J1V1 117 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 MRPS12O15235 138 aaKnown RBP6.97□□□□□ -1.29
HDAC3-202ENST00000459727 GOSR1O95249 250 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 TMEM11P17152 192 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 ARF6P62330 175 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 LEMD1Q68G75 181 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 ZNF493Q6ZR52 646 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 EXOC3-AS1Q8N2X6 119 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 FAM19A2Q8N3H0 131 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 OR10AG1Q8NH19 301 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 HILPDAQ9Y5L2 63 aa6.97□□□□□ -1.29
HDAC3-202ENST00000459727 YLPM1P49750 1951 aaKnown RBP6.97□□□□□ -1.29
HDAC3-202ENST00000459727 A0A087X0K7 114 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 TMEM189A5PLL7 270 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 RBAKDNA6NC62 111 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 C2orf70A6NJV1 201 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 LYNX1G3V0Z9 82 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 SYS1-DBNDD2H3BUS1 97 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 SIAH2O43255 324 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 APOHP02749 345 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-202ENST00000459727 APELAP0DMC3 54 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 LYNX1P0DP58 116 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 CD33P20138 364 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 UBE2E1P51965 193 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 FA2HQ7L5A8 372 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 SPATA12Q7Z6I5 190 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 FAM110DQ8TAY7 271 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-202ENST00000459727 DPF1Q92782 380 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.3
HDAC3-202ENST00000459727 ZC2HC1AQ96GY0 325 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 FANCD2OSQ96PS1 177 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 SSBP4Q9BWG4 385 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-202ENST00000459727 AP5S1Q9NUS5 200 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 HIF1ANQ9NWT6 349 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 LAMTOR2Q9Y2Q5 125 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 MYO18BQ8IUG5 2567 aa6.96□□□□□ -1.3
HDAC3-202ENST00000459727 IGHV1-24A0A0C4DH33 117 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 NCBP2LA6PVI3 153 aaKnown RBP6.95□□□□□ -1.3
HDAC3-202ENST00000459727 VWC2LB2RUY7 222 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 DLEU1O43261 78 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 TOX4O94842 621 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 PPBPP02775 128 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 TSPOP30536 169 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 ADORA2A-AS1P86434 159 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 TDRG1Q3Y452 100 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 EBLN2Q6P2I7 272 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 LINC00322Q6ZN03 302 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-202ENST00000459727 GSX1Q9H4S2 264 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-202ENST00000459727 CADP27708 2225 aa6.95□□□□□ -1.3
HDAC3-202ENST00000459727 NBPF19A0A087WUL8 3843 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 TRAV8-1A0A0A6YYK1 113 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 IGHV2-70DA0A0C4DH43 119 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 OR4C46A6NHA9 309 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 A6NNC1 897 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 ZNF25P17030 456 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-202ENST00000459727 EFNA4P52798 201 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 RELQ04864 619 aaPredicted RBP6.94□□□□□ -1.3
HDAC3-202ENST00000459727 ZNF124Q15973 351 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 RUSC1-AS1Q66K80 236 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 C12orf54Q6X4T0 127 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 ORMDL3Q8N138 153 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 PRSS3P2Q8NHM4 247 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 ORAOV1Q8WV07 137 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 SGK494Q96LW2 274 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 NPFFR1Q9GZQ6 430 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 SIRPDQ9H106 197 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 PPP1R14DQ9NXH3 145 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 GOLT1BQ9Y3E0 138 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 U3KQK5 164 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 HECTD1Q9ULT8 2610 aa6.94□□□□□ -1.3
HDAC3-202ENST00000459727 TRBV7-1A0A0A6YYK4 115 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 H3BTX0 84 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 BATFQ16520 125 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 FAM120AOSQ5T036 256 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 ASPHD1Q5U4P2 390 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 LHFPL4Q7Z7J7 247 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 EEF1AKMT3Q96AZ1 226 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 PRR25Q96S07 402 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 ASCL2Q99929 193 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 TMEM208Q9BTX3 173 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 RNF114Q9Y508 228 aa6.93□□□□□ -1.3
HDAC3-202ENST00000459727 IGHV7-81A0A0B4J1V7 117 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 FAM223BA6NKX1 122 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 F8W735 103 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-202ENST00000459727 SH2D1AO60880 128 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 ARMS2P0C7Q2 107 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 GRNP28799 593 aaKnown RBP6.92□□□□□ -1.3
HDAC3-202ENST00000459727 KLRD1Q13241 179 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 LDLRAD2Q5SZI1 272 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 LINC01545Q5VT33 79 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 FAM104BQ5XKR9 115 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 SLC25A34Q6PIV7 304 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 FAM223AQ8IWN6 122 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 Q8N9W7 124 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 FER1L6-AS1Q8NA97 138 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 ZNF738Q8NE65 137 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 ZNF502Q8TBZ5 544 aa6.92□□□□□ -1.3
HDAC3-202ENST00000459727 URB1-AS1Q96HZ7 61 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms