RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 LINC00869P0C866 280 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 CXCL2P19875 107 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 VAMP1P23763 118 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 FAUP35544 74 aaKnown RBP7.22□□□□□ -1.25
HDLBP-227ENST00000458564 SELENOTP62341 195 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 RHOBP62745 196 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 SPANXN5Q5MJ07 72 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 TMED4Q7Z7H5 227 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 S100A7AQ86SG5 101 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 DYNC2LI1Q8TCX1 351 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 TRIM63Q969Q1 353 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 PPP1R14DQ9NXH3 145 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 RNF24Q9Y225 148 aa7.22□□□□□ -1.25
HDLBP-227ENST00000458564 MRPS16Q9Y3D3 137 aaKnown RBP7.22□□□□□ -1.25
HDLBP-227ENST00000458564 STRAPQ9Y3F4 350 aaKnown RBP7.22□□□□□ -1.25
HDLBP-227ENST00000458564 H3BP45 60 aa7.21□□□□□ -1.26
HDLBP-227ENST00000458564 MRPS12O15235 138 aaKnown RBP7.21□□□□□ -1.26
HDLBP-227ENST00000458564 SFT2D2O95562 160 aa7.21□□□□□ -1.26
HDLBP-227ENST00000458564 HTN1P15515 57 aa7.21□□□□□ -1.26
HDLBP-227ENST00000458564 C4orf46Q504U0 113 aa7.21□□□□□ -1.26
HDLBP-227ENST00000458564 RAB2BQ8WUD1 216 aa7.21□□□□□ -1.26
HDLBP-227ENST00000458564 DEDD2Q8WXF8 326 aa7.21□□□□□ -1.26
HDLBP-227ENST00000458564 RPUSD4Q96CM3 377 aaKnown RBP7.21□□□□□ -1.26
HDLBP-227ENST00000458564 UHRF2Q96PU4 802 aa7.21□□□□□ -1.26
HDLBP-227ENST00000458564 BCL7BQ9BQE9 202 aa7.21□□□□□ -1.26
HDLBP-227ENST00000458564 SLC25A21Q9BQT8 299 aaPredicted RBP7.21□□□□□ -1.26
HDLBP-227ENST00000458564 PMS2P5A8MQ11 134 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 FNDC10F2Z333 226 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 OR5G3P0C626 314 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 HOXA5P20719 270 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 AP3S2P59780 193 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 ID3Q02535 119 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 PPP1R1AQ13522 171 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 OR5I1Q13606 314 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 ESRGQ1W209 222 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 LCN15Q6UWW0 184 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 Q6ZRN7 208 aaPredicted RBP7.2□□□□□ -1.26
HDLBP-227ENST00000458564 SLC50A1Q9BRV3 221 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 MRPS26Q9BYN8 205 aaKnown RBP7.2□□□□□ -1.26
HDLBP-227ENST00000458564 SLIRPQ9GZT3 109 aaKnown RBP7.2□□□□□ -1.26
HDLBP-227ENST00000458564 ZNF331Q9NQX6 463 aaPredicted RBP7.2□□□□□ -1.26
HDLBP-227ENST00000458564 MYCBP2O75592 4640 aa7.2□□□□□ -1.26
HDLBP-227ENST00000458564 SMCO3A2RU48 225 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 FABP12A6NFH5 140 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 RLN2P04090 185 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 HOXB5P09067 269 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 TNFSF8P32971 234 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 DLK1P80370 383 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 KIR3DS1Q14943 382 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 PXDC1Q5TGL8 231 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 GFI1BQ5VTD9 330 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 PATE2Q6UY27 113 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 LRRC20Q8TCA0 184 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 ODF3Q96PU9 254 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 ARV1Q9H2C2 271 aa7.19□□□□□ -1.26
HDLBP-227ENST00000458564 A0A0J9YY99 117 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 EPM2AB3EWF7 344 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 TMBIM6P55061 237 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 LINC00315P59091 139 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 UBE2MP61081 183 aaKnown RBP7.18□□□□□ -1.26
HDLBP-227ENST00000458564 POLR2GP62487 172 aaKnown RBP eCLIP7.18□□□□□ -1.26
HDLBP-227ENST00000458564 DAZ2Q13117 558 aaKnown RBP7.18□□□□□ -1.26
HDLBP-227ENST00000458564 TMEM14EPQ6UXP3 125 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 CCDC190Q86UF4 302 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 CCDC28AQ8IWP9 274 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 TOMM5Q8N4H5 51 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 C18orf15Q96N68 181 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 ARL6Q9H0F7 186 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 NPVFQ9HCQ7 196 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 ZNF586Q9NXT0 402 aa7.18□□□□□ -1.26
HDLBP-227ENST00000458564 GAGE12BA1L429 117 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 SNURFLB1AK76 121 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 GAGE7O76087 117 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 GAGE12FP0CL80 117 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 GAGE12GP0CL81 117 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 GAGE12IP0CL82 117 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 CDPF1Q6NVV7 123 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 TEPPQ6URK8 271 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 ZNF546Q86UE3 836 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 BPIFA4PQ86YQ2 179 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 ZBTB8BQ8NAP8 495 aaPredicted RBP7.17□□□□□ -1.26
HDLBP-227ENST00000458564 SMIM8Q96KF7 97 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 PYGO2Q9BRQ0 406 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 TMPRSS5Q9H3S3 457 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 PSENENQ9NZ42 101 aa7.17□□□□□ -1.26
HDLBP-227ENST00000458564 A0A096LPF7 62 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 PRAC2D3DTV9 90 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 SLC17A3O00476 420 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 SSSCA1O60232 199 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 CCNKO75909 580 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 IGLC2P0DOY2 106 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 PRB4P10163 310 aaPredicted RBP7.16□□□□□ -1.26
HDLBP-227ENST00000458564 ANXA7P20073 488 aaKnown RBP7.16□□□□□ -1.26
HDLBP-227ENST00000458564 SLC38A11Q08AI6 406 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 Q6ZTI0 123 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 LINC00305Q7Z4B0 112 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 OR10P1Q8NGE3 313 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 MCFD2Q8NI22 146 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 VSIG2Q96IQ7 327 aa7.16□□□□□ -1.26
HDLBP-227ENST00000458564 PARD6GQ9BYG4 376 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms