RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 C2orf70A6NJV1 201 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 LY6HO94772 140 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 SFTPCP11686 197 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 BATFQ16520 125 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 PET117Q6UWS5 81 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 FAM110DQ8TAY7 271 aaPredicted RBP8.58□□□□□ -1.04
RFX3-211ENST00000458034 C17orf77Q96MU5 243 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 MAP1LC3CQ9BXW4 147 aa8.58□□□□□ -1.04
RFX3-211ENST00000458034 MRPS16Q9Y3D3 137 aaKnown RBP8.58□□□□□ -1.04
RFX3-211ENST00000458034 FRYQ5TBA9 3013 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 IGHV1-24A0A0C4DH33 117 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 IGHV2-70DA0A0C4DH43 119 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 HSBP1L1C9JCN9 74 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 CRXO43186 299 aaPredicted RBP8.57□□□□□ -1.04
RFX3-211ENST00000458034 NDUFB8O95169 186 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 ZNF25P17030 456 aaPredicted RBP8.57□□□□□ -1.04
RFX3-211ENST00000458034 CD24P25063 80 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 BMI1P35226 326 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 SRSF2Q01130 221 aaKnown RBP8.57□□□□□ -1.04
RFX3-211ENST00000458034 GAGE1Q13065 139 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 KLF17Q5JT82 389 aaPredicted RBP8.57□□□□□ -1.04
RFX3-211ENST00000458034 FA2HQ7L5A8 372 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 COX8CQ7Z4L0 72 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 URB1-AS1Q96HZ7 61 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 SIRPDQ9H106 197 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 ST20Q9HBF5 79 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 LPAR2Q9HBW0 351 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 CLEC5AQ9NY25 188 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 ZNF292O60281 2723 aa8.57□□□□□ -1.04
RFX3-211ENST00000458034 RIF1Q5UIP0 2472 aaKnown RBP8.57□□□□□ -1.04
RFX3-211ENST00000458034 F8W735 103 aaPredicted RBP8.56□□□□□ -1.04
RFX3-211ENST00000458034 SYS1-DBNDD2H3BUS1 97 aa8.56□□□□□ -1.04
RFX3-211ENST00000458034 ARMS2P0C7Q2 107 aa8.56□□□□□ -1.04
RFX3-211ENST00000458034 UBE2E1P51965 193 aa8.56□□□□□ -1.04
RFX3-211ENST00000458034 NDPQ00604 133 aa8.56□□□□□ -1.04
RFX3-211ENST00000458034 FAM120AOSQ5T036 256 aa8.56□□□□□ -1.04
RFX3-211ENST00000458034 LCN12Q6JVE5 192 aa8.56□□□□□ -1.04
RFX3-211ENST00000458034 ZNF493Q6ZR52 646 aa8.56□□□□□ -1.04
RFX3-211ENST00000458034 LAMTOR2Q9Y2Q5 125 aa8.56□□□□□ -1.04
RFX3-211ENST00000458034 DSPP15924 2871 aaKnown RBP8.55□□□□□ -1.04
RFX3-211ENST00000458034 A0A087X0K7 114 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 IGHV7-81A0A0B4J1V7 117 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 OR2T8A6NH00 312 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 OR4C46A6NHA9 309 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 SH2D1AO60880 128 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 GOSR1O95249 250 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 G0S2P27469 103 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 EFNA4P52798 201 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 RELQ04864 619 aaPredicted RBP8.55□□□□□ -1.04
RFX3-211ENST00000458034 CDSNQ15517 529 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 KLK9Q2XQG4 91 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 ATOH7Q8N100 152 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 Q8N9W7 124 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 UBTD1Q9HAC8 227 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 KLK9Q9UKQ9 250 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 S4R3C0 116 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 PTPRQQ9UMZ3 2332 aa8.55□□□□□ -1.04
RFX3-211ENST00000458034 M0R3E3 92 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 DLEU1O43261 78 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 TSPOP30536 169 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 UNQ5815/PRO19632Q6UWF5 114 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 DYNAPQ8N1N2 210 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 OR10AG1Q8NH19 301 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 EEF1AKMT3Q96AZ1 226 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 C8orf49Q96NF6 230 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 SLC50A1Q9BRV3 221 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 MS4A6AQ9H2W1 248 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 AP5S1Q9NUS5 200 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 GVINP1Q7Z2Y8 2422 aa8.54□□□□□ -1.04
RFX3-211ENST00000458034 ANKRD11Q6UB99 2663 aaPredicted RBP8.53□□□□□ -1.04
RFX3-211ENST00000458034 ZNF785A8K8V0 405 aa8.53□□□□□ -1.04
RFX3-211ENST00000458034 CTSGP08311 255 aa8.53□□□□□ -1.04
RFX3-211ENST00000458034 EGR2P11161 476 aaPredicted RBP8.53□□□□□ -1.04
RFX3-211ENST00000458034 IGLL1P15814 213 aa8.53□□□□□ -1.04
RFX3-211ENST00000458034 ZFP36P26651 326 aaKnown RBP8.53□□□□□ -1.04
RFX3-211ENST00000458034 CRIP1P50238 77 aa8.53□□□□□ -1.04
RFX3-211ENST00000458034 ZNF502Q8TBZ5 544 aa8.53□□□□□ -1.04
RFX3-211ENST00000458034 PRR25Q96S07 402 aa8.53□□□□□ -1.04
RFX3-211ENST00000458034 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
RFX3-211ENST00000458034 ARHGAP32A7KAX9 2087 aa8.53□□□□□ -1.04
RFX3-211ENST00000458034 MAP1BP46821 2468 aaKnown RBP8.52□□□□□ -1.05
RFX3-211ENST00000458034 IGKV2-40A0A087WW87 121 aaPredicted RBP8.52□□□□□ -1.05
RFX3-211ENST00000458034 RBAKDNA6NC62 111 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 M0QZ24 198 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 OVOL3O00110 214 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 IGKV2D-40P01614 121 aaPredicted RBP8.52□□□□□ -1.05
RFX3-211ENST00000458034 IGHV3-23P01764 117 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 ZNF124Q15973 351 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 ECSCRQ19T08 205 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 FBLN7Q53RD9 439 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 FAM104BQ5XKR9 115 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 LYZL1Q6UWQ5 148 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 ORMDL3Q8N138 153 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 FER1L6-AS1Q8NA97 138 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 MRPL53Q96EL3 112 aaKnown RBP8.52□□□□□ -1.05
RFX3-211ENST00000458034 ATP6V0BQ99437 205 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 PMCHL2Q9BQD1 86 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 TMEM208Q9BTX3 173 aa8.52□□□□□ -1.05
RFX3-211ENST00000458034 GOLT1BQ9Y3E0 138 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms