RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 P0C879 139 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 CD28P10747 220 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 CCL5P13501 91 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 CRIP2P52943 208 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 AKR1C1Q04828 323 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 Q0VG73 95 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 FOXF1Q12946 379 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 KISS1Q15726 138 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 IQCJQ1A5X6 159 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 ZFP2Q6ZN57 461 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 ZNF705AQ6ZN79 300 aaPredicted RBP2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 Q6ZS92 163 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 LINC00299Q6ZSB3 139 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 ZNF720Q7Z2F6 126 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 ADM2Q7Z4H4 148 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 KLHL30-AS1Q8NEE0 82 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 CIRBP-AS1Q8TBR5 109 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 PSMF1Q92530 271 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 ZNF714Q96N38 554 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 PKMYT1Q99640 499 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 ATG5Q9H1Y0 275 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 BET1LQ9NYM9 111 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 RPL26L1Q9UNX3 145 aaKnown RBP2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 PLXNB1O43157 2135 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 NOTCH3Q9UM47 2321 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 LTN1O94822 1766 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 RGPD4Q7Z3J3 1758 aa2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 ZFC3H1O60293 1989 aaKnown RBP2.69□□□□□ -1.98
HMGB3P30-201ENST00000457863 CRB1P82279 1406 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 MARF1Q9Y4F3 1742 aaKnown RBP2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 LOC107986453A0A1B0GWG9 222 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 A0A1W2PPR1 153 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 INSP01308 110 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 TRACP01848 142 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 ZNF14P17017 642 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 RPL26P61254 145 aaKnown RBP2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 LSM3P62310 102 aaKnown RBP2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 EIF5AL1Q6IS14 154 aaKnown RBP2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 SOSTDC1Q6X4U4 206 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 C16orf47Q6ZP98 133 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 C14orf178Q8N769 122 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 C3orf56Q8N813 242 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 SCGB3A1Q96QR1 104 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 LITAFQ99732 161 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 GABARAPL1Q9H0R8 117 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 BCL2L10Q9HD36 194 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 DIP2BQ9P265 1576 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 DOCK1Q14185 1865 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 DAPK1P53355 1430 aa2.68□□□□□ -1.98
HMGB3P30-201ENST00000457863 TANC2Q9HCD6 1990 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 IGLV3-9A0A075B6K5 115 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 IGKV6D-41A0A0C4DH26 115 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 LECT2O14960 151 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 YPEL1O60688 119 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 IGKV1D-33P01593 117 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 IGKV1-33P01594 117 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 GYPBP06028 91 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 CCL4P13236 92 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 PEA15Q15121 130 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 Q1RN00 199 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 SPRNQ5BIV9 151 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 Q5BKY6 102 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 C10orf91Q5T1B1 145 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 NOXRED1Q6NXP6 359 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 CNEP1R1Q8N9A8 125 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 ATP6V0E2Q8NHE4 81 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 PFN4Q8NHR9 129 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 CLDND2Q8NHS1 167 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 DEFB126Q9BYW3 111 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 NPVFQ9HCQ7 196 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 TRPM6Q9BX84 2022 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 TCHHQ07283 1943 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 COL24A1Q17RW2 1714 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 SLIT3O75094 1523 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 MAGI3Q5TCQ9 1506 aa2.67□□□□□ -1.98
HMGB3P30-201ENST00000457863 PPRC1Q5VV67 1664 aaKnown RBP2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 PXDNQ92626 1479 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 ANKRD12Q6UB98 2062 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 TRBV24-1A0A075B6N3 115 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 IGHV1-3A0A0C4DH29 117 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 MUC21A0A0G2JKD1 596 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 H3BQ15 152 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 K7EP34 96 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 SLC25A20O43772 301 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 EDF1O60869 148 aaKnown RBP2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 CGAP01215 116 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 NPYP01303 97 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 IGHV1-46P01743 117 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 IGHV4-34P06331 123 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 TPT1P13693 172 aaKnown RBP2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 SLC25A16P16260 332 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 FXYD7P58549 80 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 NPC2P61916 151 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 DYNLT1P63172 113 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 MIC13Q5XKP0 118 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 ZNF660Q6AZW8 331 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 OR2T2Q6IF00 324 aa2.66□□□□□ -1.98
HMGB3P30-201ENST00000457863 UNQ5815/PRO19632Q6UWF5 114 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms