RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ATP6V0BQ99437 205 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 SSBP4Q9BWG4 385 aaPredicted RBP6.62□□□□□ -1.35
RIF1-208ENST00000457745 MANBALQ9NQG1 85 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 AURKAIP1Q9NWT8 199 aaPredicted RBP6.62□□□□□ -1.35
RIF1-208ENST00000457745 RNF114Q9Y508 228 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 TRAV34A0A0B4J273 112 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 IGHV7-4-1A0A0J9YVY3 117 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 ZNF320A2RRD8 509 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 ZNF785A8K8V0 405 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 PRAC2D3DTV9 90 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 CHEK1O14757 476 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 CRYBA1P05813 215 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 FABP1P07148 127 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 NBEAP1P0C6P0 100 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 TAS2R45P59539 299 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 RANP62826 216 aaKnown RBP6.61□□□□□ -1.35
RIF1-208ENST00000457745 SUMO1P63165 101 aaKnown RBP6.61□□□□□ -1.35
RIF1-208ENST00000457745 RELQ04864 619 aaPredicted RBP6.61□□□□□ -1.35
RIF1-208ENST00000457745 KLF5Q13887 457 aaPredicted RBP6.61□□□□□ -1.35
RIF1-208ENST00000457745 KRTAP24-1Q3LI83 254 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 FAM24BQ8N5W8 94 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 RNF182Q8N6D2 247 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 C2CD4CQ8TF44 421 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 DLX4Q92988 240 aaPredicted RBP6.61□□□□□ -1.35
RIF1-208ENST00000457745 C11orf52Q96A22 123 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 SLC35B3Q9H1N7 401 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 PARLQ9H300 379 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 Q9H3A6 140 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 JMJD1CQ15652 2540 aa6.61□□□□□ -1.35
RIF1-208ENST00000457745 ZNF705FA8MVS1 300 aaPredicted RBP6.6□□□□□ -1.35
RIF1-208ENST00000457745 F8W036 122 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 SOCS3O14543 225 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
RIF1-208ENST00000457745 IGLV2-8P01709 118 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 APOC3P02656 99 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 HIST1H1EP10412 219 aaKnown RBP6.6□□□□□ -1.35
RIF1-208ENST00000457745 S100A1P23297 94 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 FHL3Q13643 280 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 ZNF674Q2M3X9 581 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 FAM74A3Q4VXF1 159 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 REC114Q7Z4M0 266 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 OR11H1Q8NG94 326 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 OR1N2Q8NGR9 330 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 METTL26Q96S19 204 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 TMEM167BQ9NRX6 74 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 GAR1Q9NY12 217 aaKnown RBP6.6□□□□□ -1.35
RIF1-208ENST00000457745 MLXQ9UH92 298 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 SMPXQ9UHP9 88 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 RPH3ALQ9UNE2 315 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 MAST4O15021 2626 aa6.6□□□□□ -1.35
RIF1-208ENST00000457745 WNK1Q9H4A3 2382 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 IGKV3-7A0A075B6H7 116 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 TRAV8-1A0A0A6YYK1 113 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 A0A1W2PRE2 83 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 PGPA6NDG6 321 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 C2orf70A6NJV1 201 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 A8MWP6 167 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 K7EN84 100 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 IFNA1P01562 189 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 IGLV2-11P01706 119 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 SCGB2A2Q13296 93 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 RPEL1Q2QD12 228 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 FAM209BQ5JX69 171 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 OR8I2Q8N0Y5 310 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 IGF2BP2-AS1Q96M15 143 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 JMJD8Q96S16 334 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 RHPN1-AS1Q9BWJ2 59 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 SEC11CQ9BY50 192 aa6.59□□□□□ -1.35
RIF1-208ENST00000457745 IGKV2-40A0A087WW87 121 aaPredicted RBP6.58□□□□□ -1.36
RIF1-208ENST00000457745 A0A087X0K7 114 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 KRBOX1C9JBD0 128 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 LINC01619G3V211 115 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 PEX7O00628 323 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 ISLRO14498 428 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 IGKV2D-40P01614 121 aaPredicted RBP6.58□□□□□ -1.36
RIF1-208ENST00000457745 CSN3P07498 182 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 NSUN5P1Q3KNT7 163 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 AWAT1Q58HT5 328 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 SOHLH1Q5JUK2 328 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 BPIFA4PQ86YQ2 179 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 C1QL4Q86Z23 238 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 NHLRC2Q8NBF2 726 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 CLRN3Q8NCR9 226 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 ZNF331Q9NQX6 463 aaPredicted RBP6.58□□□□□ -1.36
RIF1-208ENST00000457745 TENM1Q9UKZ4 2725 aa6.58□□□□□ -1.36
RIF1-208ENST00000457745 TMEM238LA0A1B0GVL6 79 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 IZUMO1RA6ND01 250 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 ZNF727A8MUV8 499 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 TMEM250H0YL14 139 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 K7EMT4 169 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 DNASE2O00115 360 aaPredicted RBP6.57□□□□□ -1.36
RIF1-208ENST00000457745 LGALS9O00182 355 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 TCRAP04437 139 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 SLC25A5P05141 298 aaKnown RBP6.57□□□□□ -1.36
RIF1-208ENST00000457745 RPL7P18124 248 aaKnown RBP6.57□□□□□ -1.36
RIF1-208ENST00000457745 RPL35P42766 123 aaKnown RBP6.57□□□□□ -1.36
RIF1-208ENST00000457745 RPL23P62829 140 aaKnown RBP6.57□□□□□ -1.36
RIF1-208ENST00000457745 TCF24Q7RTU0 167 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 GBGT1Q8N5D6 347 aa6.57□□□□□ -1.36
RIF1-208ENST00000457745 OR4F17Q8NGA8 305 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms