RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 GFRA4Q9GZZ7 299 aa5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 GSX1Q9H4S2 264 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 SOX21Q9Y651 276 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-210ENST00000454859 ABCA1O95477 2261 aa5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 ASH1LQ9NR48 2969 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 CLPSL1A2RUU4 121 aa5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 NDUFA7O95182 113 aa5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 TMEM88Q6PEY1 159 aa5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 BAGE2Q86Y30 109 aa5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 SIGLECL1Q8N7X8 197 aa5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 SRD5A3Q9H8P0 318 aa5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 DAZ1Q9NQZ3 744 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 IL36BQ9NZH7 164 aa5.27□□□□□ -1.57
ECHDC1-210ENST00000454859 TRBV20OR9-2A0A075B6H5 130 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 TRAV2A0A0B4J234 112 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 CDX1P47902 265 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 GLMPQ8WWB7 406 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 C20orf24Q9BUV8 137 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 GNB4Q9HAV0 340 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 ZNF331Q9NQX6 463 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 MLXQ9UH92 298 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 APCP25054 2843 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 DIRC3C9JPN6 131 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 MT-ND6P03923 174 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 KIAA0141Q14154 515 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 PSG3Q16557 428 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 XP32Q5T750 250 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 Q6AWC8 147 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 BLNKQ8WV28 456 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 FAM210BQ96KR6 192 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 MS4A10Q96PG2 267 aa5.26□□□□□ -1.57
ECHDC1-210ENST00000454859 PPP5D1E7EU14 171 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 IGLV2-8P01709 118 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 CRYBA1P05813 215 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 ERVFC1-1P60608 527 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 RPS20P60866 119 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 RPEL1Q2QD12 228 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 WDR73Q6P4I2 378 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 ATP5L2Q7Z4Y8 100 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 CIARTQ8N365 385 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 MAPK1IP1LQ8NDC0 245 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 C4orf3Q8WVX3 66 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 NDFIP1Q9BT67 221 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 DERL1Q9BUN8 251 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 YAE1D1Q9NRH1 226 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 CSPG4Q6UVK1 2322 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 IGHV7-4-1A0A0J9YVY3 117 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 A0A1B0GUS0 222 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 A0A1B0GW15 77 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 SMIM27A0A1W2PRY6 76 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 XKRY2A2RUG3 117 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 NPIPB6E9PJ23 425 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 OVOL1O14753 267 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 HILS1P60008 231 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 IBA57Q5T440 356 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 Q86TA4 180 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 FAM24BQ8N5W8 94 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 NOL4LQ96MY1 436 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 SERTAD4Q9NUC0 356 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 SMPXQ9UHP9 88 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 NBPF19A0A087WUL8 3843 aa5.25□□□□□ -1.57
ECHDC1-210ENST00000454859 FBN2P35556 2912 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 DNAJC9-AS1A6NH13 148 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 A8MWL6 223 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 K7EN84 100 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 EIF3GO75821 320 aaKnown RBP eCLIP5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 ID1P41134 155 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 WIPF2Q8TF74 440 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 V9GYV3 84 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 SH2D7A6NKC9 451 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 M0QZ24 198 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 GATCO43716 136 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 IGLV2-11P01706 119 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 IGHV3-23P01764 117 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 S100A8P05109 93 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 CXCL1P09341 107 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 CT45A10P0DMU9 189 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 SRD5A1P18405 259 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 FOXA3P55318 350 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 C9orf47Q6ZRZ4 202 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 TSKUQ8WUA8 353 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 DAZAP1Q96EP5 407 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 LINC00477Q96M19 166 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 KLK15Q9H2R5 256 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 PEMTQ9UBM1 199 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 PSG8Q9UQ74 426 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 SMAD5-AS1Q9Y6J3 95 aa5.24□□□□□ -1.57
ECHDC1-210ENST00000454859 C19orf71A6NCJ1 209 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 SMAD7O15105 426 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 LEMD1Q68G75 181 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 ODF3Q96PU9 254 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 GNB1LQ9BYB4 327 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 NRN1Q9NPD7 142 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 SIGLEC8Q9NYZ4 499 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 NAT8BQ9UHF3 227 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 ABCA12Q86UK0 2595 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 IZUMO1RA6ND01 250 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 LCN12Q6JVE5 192 aa5.23□□□□□ -1.57
ECHDC1-210ENST00000454859 Q6ZS46 218 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms