RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 NRN1Q9NPD7 142 aa7.73□□□□□ -1.17
CCDC171-203ENST00000449575 IL36BQ9NZH7 164 aa7.73□□□□□ -1.17
CCDC171-203ENST00000449575 C17orf112F2Z3M2 114 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 G3V318 75 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 ATP6V0E1O15342 81 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 RBFOX2O43251 390 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCDC171-203ENST00000449575 HLA-DRB1P01911 266 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 APELAP0DMC3 54 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 IAPPP10997 89 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 EGR2P11161 476 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-203ENST00000449575 GNB1P62873 340 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 PET117Q6UWS5 81 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 HAPLN4Q86UW8 402 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 KCNS1Q96KK3 526 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 TMEM147Q9BVK8 224 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 ZNF430Q9H8G1 570 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-203ENST00000449575 VDAC2P45880 294 aaPredicted RBP7.72□□□□□ -1.17
CCDC171-203ENST00000449575 AMTP48728 403 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 ACSM6Q6P461 480 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 BORCS7Q96B45 105 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 GNB1LQ9BYB4 327 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 CACNG5Q9UF02 275 aa7.72□□□□□ -1.17
CCDC171-203ENST00000449575 A0A0G2JRQ6 117 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 IGLC7A0M8Q6 106 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 IGKV1-5P01602 117 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 OR9G9P0C7N8 305 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 CBLN1P23435 193 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 KIR2DS2P43631 304 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 SPANXN5Q5MJ07 72 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 LCNL1Q6ZST4 164 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 WNT10AQ9GZT5 417 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 TMEM140Q9NV12 185 aa7.71□□□□□ -1.17
CCDC171-203ENST00000449575 TRAV34A0A0B4J273 112 aa7.71□□□□□ -1.18
CCDC171-203ENST00000449575 KRTAP21-3Q3LHN1 58 aa7.71□□□□□ -1.18
CCDC171-203ENST00000449575 VMA21Q3ZAQ7 101 aa7.71□□□□□ -1.18
CCDC171-203ENST00000449575 PRR27Q6MZM9 219 aa7.71□□□□□ -1.18
CCDC171-203ENST00000449575 TEX45Q8NA69 505 aa7.71□□□□□ -1.18
CCDC171-203ENST00000449575 WIPF2Q8TF74 440 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-203ENST00000449575 GATAD1Q8WUU5 269 aa7.71□□□□□ -1.18
CCDC171-203ENST00000449575 CITED2Q99967 270 aaPredicted RBP7.71□□□□□ -1.18
CCDC171-203ENST00000449575 HMGB3O15347 200 aaKnown RBP7.7□□□□□ -1.18
CCDC171-203ENST00000449575 NPPCP23582 126 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 FXYD3Q14802 87 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 TNXAQ16473 311 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 POU2AF1Q16633 256 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 TCTEX1D4Q5JR98 221 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 TMEM14EPQ6UXP3 125 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 CGB1A6NKQ9 187 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 SNURFLB1AK76 121 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 NDUFB4O95168 129 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 RPEL1Q2QD12 228 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 ZNF562Q6V9R5 426 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 TMEM167AQ8TBQ9 72 aa7.7□□□□□ -1.18
CCDC171-203ENST00000449575 QTRT1Q9BXR0 403 aaKnown RBP7.7□□□□□ -1.18
CCDC171-203ENST00000449575 M0QZ24 198 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 ZNF324O75467 553 aaPredicted RBP7.69□□□□□ -1.18
CCDC171-203ENST00000449575 RHOBP62745 196 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 ECSCRQ19T08 205 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 ASPHD1Q5U4P2 390 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 SHISA2Q6UWI4 295 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 Q6ZRM9 215 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 GNB4Q9HAV0 340 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 LY96Q9Y6Y9 160 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 TRAV9-2A0A087WT02 112 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 UPK2O00526 184 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 CNIH1O95406 144 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 IGF1P05019 195 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 CD28P10747 220 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 ARPC1AQ92747 370 aa7.69□□□□□ -1.18
CCDC171-203ENST00000449575 P0C879 139 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 C3orf79P0CE67 100 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 CFHR3Q02985 330 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 C19orf54Q5BKX5 351 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 C12orf54Q6X4T0 127 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 NIT1Q86X76 327 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 OR10P1Q8NGE3 313 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 SRSF12Q8WXF0 261 aaKnown RBP7.68□□□□□ -1.18
CCDC171-203ENST00000449575 A0A1W2PS18 150 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 PMCHP20382 165 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 PPIFP30405 207 aaKnown RBP7.68□□□□□ -1.18
CCDC171-203ENST00000449575 ERVK-16P61578 105 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 RPL8P62917 257 aaKnown RBP7.68□□□□□ -1.18
CCDC171-203ENST00000449575 MMD2Q8IY49 270 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 KLK15Q9H2R5 256 aa7.68□□□□□ -1.18
CCDC171-203ENST00000449575 PSMB11A5LHX3 300 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 C3orf56Q8N813 242 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 OR10W1Q8NGF6 305 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 VSTM2AQ8TAG5 236 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 NPCDR1Q9BY65 106 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 NAT8BQ9UHF3 227 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 CMYA5Q8N3K9 4069 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 TRAV41A0A0B4J266 112 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 A0A1W2PPV4 95 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 TEX22C9J3V5 150 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 AREGP15514 252 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 ATP5G3P48201 142 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 SPINK9Q5DT21 86 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 C18orf65Q6ZTR6 163 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 H2BFWTQ7Z2G1 175 aa7.67□□□□□ -1.18
CCDC171-203ENST00000449575 UHRF2Q96PU4 802 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms