RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TRAV3A0A0B4J244 114 aa10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 TCRBV4S1A1TA0A5B7 111 aa10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 K7EMI3 77 aa10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 GLRXP35754 106 aa10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 FLYWCH2Q96CP2 140 aaKnown RBP10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 RPP21Q9H633 154 aaKnown RBP10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 PRR14LQ5THK1 2151 aa10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 TNFRSF1AP19438 455 aa10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 LOXL3P58215 753 aa10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 RAB1BQ9H0U4 201 aa10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 PRO0461Q9UI25 63 aa10.78□□□□□ -0.68
SYNGAP1-204ENST00000449372 IGKV1D-17A0A075B6S4 117 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 SGK494Q96LW2 274 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 FZR1Q9UM11 496 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 MUC6Q6W4X9 2439 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 NPIPB6E9PJ23 425 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 C3orf36Q3SXR2 165 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 GVINP1Q7Z2Y8 2422 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 FMC1Q96HJ9 113 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 FAM90A27PA6NNH2 459 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 IGHV3-13P01766 116 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 TNFAIP6P98066 277 aaPredicted RBP10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 HOXA4Q00056 320 aaPredicted RBP10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 ZFAND6Q6FIF0 208 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 CHAC1Q9BUX1 264 aa10.77□□□□□ -0.69
SYNGAP1-204ENST00000449372 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 INS-IGF2F8WCM5 200 aa10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 LTAP01374 205 aa10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 PRELID3AQ96N28 172 aa10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 ANXA2RQ3ZCQ2 193 aa10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 RBPMS2Q6ZRY4 209 aaKnown RBP10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 TEX29Q8N6K0 151 aa10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 GLMPQ8WWB7 406 aa10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 GFRA4Q9GZZ7 299 aa10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 HEATR1Q9H583 2144 aaKnown RBP10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 RIGQ13278 110 aa10.76□□□□□ -0.69
SYNGAP1-204ENST00000449372 SPRY3O43610 288 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 RNASE2P10153 161 aaKnown RBP10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 FHL3Q13643 280 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 Q6AWC8 147 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 OR4C13Q8NGP0 309 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 RAX2Q96IS3 184 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 C7orf69Q9H7B7 122 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 RPUSD1Q9UJJ7 312 aaKnown RBP10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 M0R1B8 84 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 PSMG4Q5JS54 123 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 ZNF414Q96IQ9 312 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 ZNF492Q9P255 531 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 IGHV3OR15-7A0A075B7D8 119 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 ZNRF1Q8ND25 227 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 HIGD1BQ9P298 99 aa10.75□□□□□ -0.69
SYNGAP1-204ENST00000449372 ANKRD11Q6UB99 2663 aaPredicted RBP10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 TRAV5A0A0B4J249 113 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 FAM106CPP0CH98 169 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 FAM106AQ4KMX7 169 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 C22orf34Q6ZV56 151 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 CEND1Q8N111 149 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 EPDR1Q9UM22 224 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 B9A039 149 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 GATA4P43694 442 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 SLC25A48Q6ZT89 311 aaKnown RBP10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 Q8NA96 180 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 FAM57AQ8TBR7 257 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 ITLN1Q8WWA0 313 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 TTTY13Q9BZ97 58 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 CEP250Q9BV73 2442 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 Q8TCH9 128 aa10.74□□□□□ -0.69
SYNGAP1-204ENST00000449372 TANC2Q9HCD6 1990 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 LINC00322Q6ZN03 302 aaPredicted RBP10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 ZNF329Q86UD4 541 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 SAA1P0DJI8 122 aaPredicted RBP10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 GNG5P63218 68 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 GAGE12JA6NER3 117 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 C16orf97H3BN30 126 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 PROP1O75360 226 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 GAGE7O76087 117 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 GAGE12FP0CL80 117 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 GAGE12GP0CL81 117 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 GAGE12IP0CL82 117 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 IFI27P40305 119 aaPredicted RBP10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 LOXL1Q08397 574 aaPredicted RBP10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 GAGE4Q13068 117 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 NFE4Q86UQ8 179 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 TMEM167AQ8TBQ9 72 aa10.73□□□□□ -0.69
SYNGAP1-204ENST00000449372 NBEAQ8NFP9 2946 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 A0A096LNJ9 63 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 NPIPB5A8MRT5 1133 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 M0QXV9 152 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 NHLRC4P0CG21 123 aaPredicted RBP10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 OR9G1Q8NH87 305 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 VCX2Q9H322 139 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 RIF1Q5UIP0 2472 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 PGPA6NDG6 321 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 PYYP10082 97 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 C17orf58Q2M2W7 97 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 MORN5Q5VZ52 161 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 ATP6V0E2Q8NHE4 81 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 LOC389332A0A1B0GUA5 103 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
SYNGAP1-204ENST00000449372 LCNL1Q6ZST4 164 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms