RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 IL11RAQ14626 422 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 TAL2Q16559 108 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 LYZL1Q6UWQ5 148 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 ZNF785A8K8V0 405 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 LCNL1Q6ZST4 164 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 FOXC2Q99958 501 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 VSTM5A8MXK1 200 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 LAMTOR5O43504 91 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 EVI2AP22794 236 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 C10orf55Q5SWW7 151 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 ZFAND6Q6FIF0 208 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 NFE4Q86UQ8 179 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 TMEM160Q9NX00 188 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 ABCA1O95477 2261 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 TRBV7-9A0A0J9YWB2 115 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 DPM2O94777 84 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 LEPP41159 167 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 FHL3Q13643 280 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 HES7Q9BYE0 225 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 ZMAT4Q9H898 229 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 PCSK5Q92824 1860 aa7.49□□□□□ -1.21
SYNPO2-204ENST00000448416 LYZL6O75951 148 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 CCL4P13236 92 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 TEX29Q8N6K0 151 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 MAPKAPK5-AS1Q8N8E1 139 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 INTS1Q8N201 2190 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 ZNRD1Q9P1U0 126 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 VPS13AQ96RL7 3174 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 TMEM8BA6NDV4 472 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 CGB3P0DN86 165 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 CGB7P0DN87 165 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 TWIST1Q15672 202 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 CFAP126Q5VTH2 177 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 DLX4Q92988 240 aaPredicted RBP7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 MRPS17Q9Y2R5 130 aaKnown RBP7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 ZNF318Q5VUA4 2279 aa7.48□□□□□ -1.21
SYNPO2-204ENST00000448416 PLXNB1O43157 2135 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 SRRM5B3KS81 715 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 SMCPP49901 116 aaPredicted RBP7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 RITA1Q96K30 269 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 HOXA3O43365 443 aaPredicted RBP7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 CNIH1O95406 144 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 TNFRSF1AP19438 455 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 SRSF8Q9BRL6 282 aaKnown RBP7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 IGHV3-21A0A0B4J1V1 117 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 TRAV40A0A0B4J280 105 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 FAM90A27PA6NNH2 459 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 IL4P05112 153 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 CRIP1P50238 77 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 PEAR1Q5VY43 1037 aaPredicted RBP7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 C8orf46Q8TAG6 207 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 PTH2Q96A98 100 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 MAP1LC3AQ9H492 121 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 PSMB2P49721 201 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 HIGD1AQ9Y241 93 aa7.47□□□□□ -1.21
SYNPO2-204ENST00000448416 CELSR3Q9NYQ7 3312 aa7.46□□□□□ -1.21
SYNPO2-204ENST00000448416 LOC107984156A0A0G2JMH3 177 aa7.46□□□□□ -1.21
SYNPO2-204ENST00000448416 RUSC1-AS1Q66K80 236 aa7.46□□□□□ -1.21
SYNPO2-204ENST00000448416 Q6ZS92 163 aa7.46□□□□□ -1.21
SYNPO2-204ENST00000448416 ARL17AQ8IVW1 177 aa7.46□□□□□ -1.21
SYNPO2-204ENST00000448416 SMIM20Q8N5G0 67 aa7.46□□□□□ -1.21
SYNPO2-204ENST00000448416 PPDPFLQ8WWR9 84 aa7.46□□□□□ -1.21
SYNPO2-204ENST00000448416 TTTY12Q9BZ98 90 aa7.46□□□□□ -1.21
SYNPO2-204ENST00000448416 ATP5LO75964 103 aa7.46□□□□□ -1.22
SYNPO2-204ENST00000448416 LYZP61626 148 aa7.46□□□□□ -1.22
SYNPO2-204ENST00000448416 HCP5Q6MZN7 132 aa7.46□□□□□ -1.22
SYNPO2-204ENST00000448416 SFTA2Q6UW10 78 aa7.46□□□□□ -1.22
SYNPO2-204ENST00000448416 OR10X1Q8NGY0 326 aa7.46□□□□□ -1.22
SYNPO2-204ENST00000448416 TRGV9Q99603 122 aa7.46□□□□□ -1.22
SYNPO2-204ENST00000448416 MZT1Q08AG7 82 aa7.46□□□□□ -1.22
SYNPO2-204ENST00000448416 ANXA2RQ3ZCQ2 193 aa7.46□□□□□ -1.22
SYNPO2-204ENST00000448416 FAM110AQ9BQ89 295 aa7.46□□□□□ -1.22
SYNPO2-204ENST00000448416 LY6G6EA0A0G2JKS1 128 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 INS-IGF2F8WCM5 200 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 HLA-DRB4P13762 266 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 TMEM75Q8N9X5 138 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 RPEQ96AT9 228 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 VCX2Q9H322 139 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 U3KQA8 63 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 HLA-DRB4X5D2U9 266 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 TRBV6-1A0A0K0K1D8 114 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 CGB1A6NKQ9 187 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 HOXB4P17483 251 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 IGHV1-2P23083 117 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 MORN3Q6PF18 240 aaPredicted RBP7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 TMEM158Q8WZ71 300 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 MRPL20Q9BYC9 149 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 CACNA1EQ15878 2313 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 NCBP2LA6PVI3 153 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 CRYGCP07315 174 aa7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 MRPL35Q9NZE8 188 aaKnown RBP7.45□□□□□ -1.22
SYNPO2-204ENST00000448416 RBP4P02753 201 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 FAM201AQ5SY85 155 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 C8orf49Q96NF6 230 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 TRBV7-3A0A075B6L6 115 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 TNFRSF13BO14836 293 aaPredicted RBP7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 CARD19Q96LW7 228 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 FREM2Q5SZK8 3169 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 MOGAT3Q86VF5 341 aa7.44□□□□□ -1.22
SYNPO2-204ENST00000448416 TEN1Q86WV5 123 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms