RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 DEFB114Q30KQ6 69 aa14.74□□□□□ -0.05
SGCE-207ENST00000447873 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.74□□□□□ -0.05
SGCE-207ENST00000447873 RBPMS2Q6ZRY4 209 aaKnown RBP14.74□□□□□ -0.05
SGCE-207ENST00000447873 FAM210AQ96ND0 272 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 NRN1Q9NPD7 142 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 A0A1W2PRE2 83 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 LINC00862A6NCI5 91 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 RBFOX3A6NFN3 312 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 SLC17A3O00476 420 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 NDUFB4O95168 129 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 BCL2P10415 239 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 CST9LP1Q5W188 147 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 GBGT1Q8N5D6 347 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 EIF5A2Q9GZV4 153 aaKnown RBP14.73□□□□□ -0.05
SGCE-207ENST00000447873 MED9Q9NWA0 146 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 YTHDF2Q9Y5A9 579 aaKnown RBP14.73□□□□□ -0.05
SGCE-207ENST00000447873 ARL2-SNX15V9GYD0 113 aa14.73□□□□□ -0.05
SGCE-207ENST00000447873 FAM74A7A6NL05 159 aa14.72□□□□□ -0.05
SGCE-207ENST00000447873 TAGLN2P37802 199 aaKnown RBP14.72□□□□□ -0.05
SGCE-207ENST00000447873 PAFAH1B2P68402 229 aa14.72□□□□□ -0.05
SGCE-207ENST00000447873 PSG9Q00887 426 aa14.72□□□□□ -0.05
SGCE-207ENST00000447873 CD300EQ496F6 205 aaPredicted RBP14.72□□□□□ -0.05
SGCE-207ENST00000447873 TOR2AQ5JU69 321 aa14.72□□□□□ -0.05
SGCE-207ENST00000447873 SPATA3Q8NHX4 192 aa14.72□□□□□ -0.05
SGCE-207ENST00000447873 RARRES2Q99969 163 aa14.72□□□□□ -0.05
SGCE-207ENST00000447873 MS4A6AQ9H2W1 248 aa14.72□□□□□ -0.05
SGCE-207ENST00000447873 TRRAPQ9Y4A5 3859 aa14.71□□□□□ -0.05
SGCE-207ENST00000447873 DNASE2O00115 360 aaPredicted RBP14.71□□□□□ -0.05
SGCE-207ENST00000447873 ZNF253O75346 499 aa14.71□□□□□ -0.05
SGCE-207ENST00000447873 TMEM61Q8N0U2 210 aa14.71□□□□□ -0.05
SGCE-207ENST00000447873 WFDC9Q8NEX5 89 aa14.71□□□□□ -0.05
SGCE-207ENST00000447873 SLC50A1Q9BRV3 221 aa14.71□□□□□ -0.05
SGCE-207ENST00000447873 MCRIP2Q9BUT9 160 aaKnown RBP14.71□□□□□ -0.05
SGCE-207ENST00000447873 Q9H3A6 140 aa14.71□□□□□ -0.05
SGCE-207ENST00000447873 VAX2Q9UIW0 290 aa14.71□□□□□ -0.05
SGCE-207ENST00000447873 ANK2Q01484 3957 aa14.7□□□□□ -0.06
SGCE-207ENST00000447873 LOC102723971A0A1B0GUV8 181 aa14.7□□□□□ -0.06
SGCE-207ENST00000447873 TFPI2P48307 235 aa14.7□□□□□ -0.06
SGCE-207ENST00000447873 COMMD7Q86VX2 200 aa14.7□□□□□ -0.06
SGCE-207ENST00000447873 WFDC3Q8IUB2 231 aa14.7□□□□□ -0.06
SGCE-207ENST00000447873 LYPD1Q8N2G4 141 aa14.7□□□□□ -0.06
SGCE-207ENST00000447873 C16orf92Q96LL3 132 aa14.7□□□□□ -0.06
SGCE-207ENST00000447873 NKX6-2Q9C056 277 aaPredicted RBP14.7□□□□□ -0.06
SGCE-207ENST00000447873 AAMDCQ9H7C9 122 aa14.7□□□□□ -0.06
SGCE-207ENST00000447873 ZNF331Q9NQX6 463 aaPredicted RBP14.7□□□□□ -0.06
SGCE-207ENST00000447873 TRAV25A0A0B4J276 109 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 RAB19A4D1S5 217 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 PGPA6NDG6 321 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 C11orf94C9JXX5 98 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 TSPAN4O14817 238 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 IGLV1-51P01701 117 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 SUMO1P63165 101 aaKnown RBP14.69□□□□□ -0.06
SGCE-207ENST00000447873 MEF2BQ02080 365 aaPredicted RBP14.69□□□□□ -0.06
SGCE-207ENST00000447873 ZNF506Q5JVG8 444 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 C9orf66Q5T8R8 295 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 SAMD13Q5VXD3 122 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 EXOC3-AS1Q8N2X6 119 aa14.69□□□□□ -0.06
SGCE-207ENST00000447873 GGTLC3B5MD39 225 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 ATP5G3P48201 142 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 INSL3P51460 131 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 ICAM4Q14773 271 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 RXFP4Q8TDU9 374 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 DCANP1Q8TF63 244 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 TXNDC17Q9BRA2 123 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 OTORQ9NRC9 128 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 SOCS3O14543 225 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 PEA15Q15121 130 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 IGFL4Q6B9Z1 124 aa14.68□□□□□ -0.06
SGCE-207ENST00000447873 ISLRO14498 428 aa14.67□□□□□ -0.06
SGCE-207ENST00000447873 NDUFA5Q16718 116 aa14.67□□□□□ -0.06
SGCE-207ENST00000447873 OR2K2Q8NGT1 345 aa14.67□□□□□ -0.06
SGCE-207ENST00000447873 SPAG8Q99932 426 aaPredicted RBP14.67□□□□□ -0.06
SGCE-207ENST00000447873 TRAV8-2A0A0B4J237 113 aa14.66□□□□□ -0.06
SGCE-207ENST00000447873 IZUMO1RA6ND01 250 aa14.66□□□□□ -0.06
SGCE-207ENST00000447873 K7EQG2 157 aa14.66□□□□□ -0.06
SGCE-207ENST00000447873 ID1P41134 155 aa14.66□□□□□ -0.06
SGCE-207ENST00000447873 SRSF3P84103 164 aaKnown RBP14.66□□□□□ -0.06
SGCE-207ENST00000447873 GUCA2BQ16661 112 aa14.66□□□□□ -0.06
SGCE-207ENST00000447873 CMTM2Q8TAZ6 248 aa14.66□□□□□ -0.06
SGCE-207ENST00000447873 CLEC5AQ9NY25 188 aa14.66□□□□□ -0.06
SGCE-207ENST00000447873 NOTCH3Q9UM47 2321 aa14.65□□□□□ -0.06
SGCE-207ENST00000447873 TRAV2A0A0B4J234 112 aa14.65□□□□□ -0.06
SGCE-207ENST00000447873 SLC25A5P05141 298 aaKnown RBP14.65□□□□□ -0.06
SGCE-207ENST00000447873 IGLL1P15814 213 aa14.65□□□□□ -0.06
SGCE-207ENST00000447873 CD81P60033 236 aa14.65□□□□□ -0.06
SGCE-207ENST00000447873 LCN12Q6JVE5 192 aa14.65□□□□□ -0.06
SGCE-207ENST00000447873 CCDC28AQ8IWP9 274 aa14.65□□□□□ -0.06
SGCE-207ENST00000447873 RNF182Q8N6D2 247 aa14.65□□□□□ -0.06
SGCE-207ENST00000447873 C5orf17Q8NAS9 161 aa14.65□□□□□ -0.06
SGCE-207ENST00000447873 SMDT1Q9H4I9 107 aa14.65□□□□□ -0.06
SGCE-207ENST00000447873 OR4C46A6NHA9 309 aa14.64□□□□□ -0.07
SGCE-207ENST00000447873 HLA-DMBP28068 263 aa14.64□□□□□ -0.07
SGCE-207ENST00000447873 CSN1S1P47710 185 aa14.64□□□□□ -0.07
SGCE-207ENST00000447873 LINC00052Q96N35 136 aa14.64□□□□□ -0.07
SGCE-207ENST00000447873 TREM1Q9NP99 234 aa14.64□□□□□ -0.07
SGCE-207ENST00000447873 M0R3E3 92 aa14.64□□□□□ -0.07
SGCE-207ENST00000447873 PDE6DO43924 150 aa14.64□□□□□ -0.07
SGCE-207ENST00000447873 SNRPD3P62318 126 aaKnown RBP14.64□□□□□ -0.07
SGCE-207ENST00000447873 PRR31Q5SQ13 230 aa14.64□□□□□ -0.07
SGCE-207ENST00000447873 UQCC3Q6UW78 93 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms