RNA–Protein interactions for RNA: ENST00000447439.6

KLHL3-202, Transcript of kelch like family member 3, humanhuman

TSL 1 (best)

Gene KLHL3, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-202ENST00000447439 RBPMS2Q6ZRY4 209 aaKnown RBP7.42□□□□□ -1.22
KLHL3-202ENST00000447439 SHANK2-AS3Q9BTD1 123 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 AKAP6Q13023 2319 aa7.42□□□□□ -1.22
KLHL3-202ENST00000447439 OR2T8A6NH00 312 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 GNG7O60262 68 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 FXYD7P58549 80 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 ERASQ7Z444 233 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 LOC105371242A0A075B767 164 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 IGKV2-40A0A087WW87 121 aaPredicted RBP7.41□□□□□ -1.22
KLHL3-202ENST00000447439 A0A1W2PPR1 153 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 H3BRN7 92 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 OVOL3O00110 214 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 IGKV2D-40P01614 121 aaPredicted RBP7.41□□□□□ -1.22
KLHL3-202ENST00000447439 ZFP36P26651 326 aaKnown RBP7.41□□□□□ -1.22
KLHL3-202ENST00000447439 TCTAP57738 103 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 BPIFA4PQ86YQ2 179 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 OR4F17Q8NGA8 305 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 Q8TAT8 98 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 FANCD2OSQ96PS1 177 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 UQCR10Q9UDW1 63 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 PSG8Q9UQ74 426 aa7.41□□□□□ -1.22
KLHL3-202ENST00000447439 CACNA1BQ00975 2339 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 TMEM238LA0A1B0GVL6 79 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 NDUFB8O95169 186 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 FAM106CPP0CH98 169 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 FAM106AQ4KMX7 169 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 ANKRD39Q53RE8 183 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 ATP5L2Q7Z4Y8 100 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 LY6G5BQ8NDX9 201 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 ZNF414Q96IQ9 312 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 TMUB1Q9BVT8 246 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 ZNF492Q9P255 531 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 WNK2Q9Y3S1 2297 aa7.4□□□□□ -1.22
KLHL3-202ENST00000447439 IGHV3OR16-13A0A075B7E8 117 aa7.4□□□□□ -1.23
KLHL3-202ENST00000447439 LOC102724200A0A096LPH7 203 aaPredicted RBP7.4□□□□□ -1.23
KLHL3-202ENST00000447439 IGHV3-74A0A0B4J1X5 117 aa7.4□□□□□ -1.23
KLHL3-202ENST00000447439 F8W735 103 aaPredicted RBP7.4□□□□□ -1.23
KLHL3-202ENST00000447439 APOHP02749 345 aaPredicted RBP7.4□□□□□ -1.23
KLHL3-202ENST00000447439 VMO1Q7Z5L0 202 aa7.4□□□□□ -1.23
KLHL3-202ENST00000447439 TMEM14CQ9P0S9 112 aa7.4□□□□□ -1.23
KLHL3-202ENST00000447439 LOC389332A0A1B0GUA5 103 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 SERTM2A0A1B0GWG4 89 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 C5orf64Q2M2E5 130 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 RAB1BQ9H0U4 201 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 LAMTOR2Q9Y2Q5 125 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 TMEM213A2RRL7 107 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 NPIPB6E9PJ23 425 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 MRPS12O15235 138 aaKnown RBP7.39□□□□□ -1.23
KLHL3-202ENST00000447439 DLEU1O43261 78 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 LINC00614P0C842 121 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 TSPOP30536 169 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 UNQ5815/PRO19632Q6UWF5 114 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 ARPC1AQ92747 370 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 C1RLQ9NZP8 487 aa7.39□□□□□ -1.23
KLHL3-202ENST00000447439 TRAV9-2A0A087WT02 112 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 OR4C46A6NHA9 309 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 LEPROTL1O95214 131 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 PSG3Q16557 428 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 CT83Q5H943 113 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 TMEM75Q8N9X5 138 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 OR11H6Q8NGC7 330 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 TIMD4Q96H15 378 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 TMEM70Q9BUB7 260 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 IGHV3-49A0A0A0MS15 119 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.38□□□□□ -1.23
KLHL3-202ENST00000447439 LOXL1Q08397 574 aaPredicted RBP7.38□□□□□ -1.23
KLHL3-202ENST00000447439 TMEM190Q8WZ59 177 aa7.38□□□□□ -1.23
KLHL3-202ENST00000447439 SOX21Q9Y651 276 aaPredicted RBP7.38□□□□□ -1.23
KLHL3-202ENST00000447439 SPTBN1Q01082 2364 aaKnown RBP7.38□□□□□ -1.23
KLHL3-202ENST00000447439 IGLV11-55A0A075B6I3 123 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 SYS1-DBNDD2H3BUS1 97 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 HOXB4P17483 251 aaPredicted RBP7.37□□□□□ -1.23
KLHL3-202ENST00000447439 FOXE3Q13461 319 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 ECSCRQ19T08 205 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 COL5A1-AS1Q5SY13 56 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 GOLT1BQ9Y3E0 138 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 IGHV3OR16-10A0A075B7F0 116 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 A0A1B0GUT8 65 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 WI2-2373I1.2A0A1W2PRP0 233 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 LINC01548A6NM66 108 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 ODF3BA8MYP8 253 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 SMKR1H3BMG3 65 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 SNAI2O43623 268 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 NDUFA3O95167 84 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 VGLL1Q99990 258 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 C21orf62Q9NYP8 219 aa7.37□□□□□ -1.23
KLHL3-202ENST00000447439 HAX1O00165 279 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 NCR2O95944 276 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 TMEM11P17152 192 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 PRTN3P24158 256 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 CEACAM3P40198 252 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 ZNF80P51504 273 aaPredicted RBP7.36□□□□□ -1.23
KLHL3-202ENST00000447439 MFAP4P55083 255 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 DMRTA1Q5VZB9 504 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 LYZL1Q6UWQ5 148 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 NPBQ8NG41 125 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 GFRA4Q9GZZ7 299 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 CHD8Q9HCK8 2581 aa7.36□□□□□ -1.23
KLHL3-202ENST00000447439 ZNF207O43670 478 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms