RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 NDUFB4O95168 129 aa11.34□□□□□ -0.59
CCNE1-203ENST00000444983 SNRPCP09234 159 aaKnown RBP11.34□□□□□ -0.59
CCNE1-203ENST00000444983 CCL20P78556 96 aa11.34□□□□□ -0.59
CCNE1-203ENST00000444983 PMS2P11Q13670 270 aa11.34□□□□□ -0.59
CCNE1-203ENST00000444983 PCNPQ8WW12 178 aaKnown RBP11.34□□□□□ -0.59
CCNE1-203ENST00000444983 MS4A6AQ9H2W1 248 aa11.34□□□□□ -0.59
CCNE1-203ENST00000444983 CMYA5Q8N3K9 4069 aa11.34□□□□□ -0.59
CCNE1-203ENST00000444983 ZNF253O75346 499 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 MEOX2P50222 304 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 UBE2L3P68036 154 aaKnown RBP11.33□□□□□ -0.6
CCNE1-203ENST00000444983 PDE6HQ13956 83 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 GUK1Q16774 197 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 ZNF256Q9Y2P7 627 aaPredicted RBP11.33□□□□□ -0.6
CCNE1-203ENST00000444983 MGAM2Q2M2H8 2515 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 TRAV2A0A0B4J234 112 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 SLC17A3O00476 420 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 HBE1P02100 147 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 ATF4P18848 351 aaPredicted RBP11.33□□□□□ -0.6
CCNE1-203ENST00000444983 PSMB3P49720 205 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 RPL11P62913 178 aaKnown RBP11.33□□□□□ -0.6
CCNE1-203ENST00000444983 RBPMS2Q6ZRY4 209 aaKnown RBP11.33□□□□□ -0.6
CCNE1-203ENST00000444983 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
CCNE1-203ENST00000444983 TMEM167BQ9NRX6 74 aa11.33□□□□□ -0.6
CCNE1-203ENST00000444983 SORL1Q92673 2214 aa11.32□□□□□ -0.6
CCNE1-203ENST00000444983 TRAV8-2A0A0B4J237 113 aa11.32□□□□□ -0.6
CCNE1-203ENST00000444983 H3BTX0 84 aa11.32□□□□□ -0.6
CCNE1-203ENST00000444983 K7EQG2 157 aa11.32□□□□□ -0.6
CCNE1-203ENST00000444983 CLLU1Q5K131 121 aa11.32□□□□□ -0.6
CCNE1-203ENST00000444983 ZNF331Q9NQX6 463 aaPredicted RBP11.32□□□□□ -0.6
CCNE1-203ENST00000444983 IGKV3-7A0A075B6H7 116 aa11.31□□□□□ -0.6
CCNE1-203ENST00000444983 A0A1B0GV50 99 aa11.31□□□□□ -0.6
CCNE1-203ENST00000444983 GBGT1Q8N5D6 347 aa11.31□□□□□ -0.6
CCNE1-203ENST00000444983 BLNKQ8WV28 456 aa11.31□□□□□ -0.6
CCNE1-203ENST00000444983 NBEAL1Q6ZS30 2694 aa11.31□□□□□ -0.6
CCNE1-203ENST00000444983 TEX46H3BTG2 121 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 BEAN1Q3B7T3 259 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 OXLD1Q5BKU9 147 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 LCN12Q6JVE5 192 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 LYPD1Q8N2G4 141 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 A0A1W2PRE2 83 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 ISLRO14498 428 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 PAFAH1B2P68402 229 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 SAMD13Q5VXD3 122 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 FAM24BQ8N5W8 94 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 ARL2-SNX15V9GYD0 113 aa11.3□□□□□ -0.6
CCNE1-203ENST00000444983 FAM74A7A6NL05 159 aa11.29□□□□□ -0.6
CCNE1-203ENST00000444983 RANP62826 216 aaKnown RBP11.29□□□□□ -0.6
CCNE1-203ENST00000444983 PSG9Q00887 426 aa11.29□□□□□ -0.6
CCNE1-203ENST00000444983 EGFEM1PQ0D2K5 195 aa11.29□□□□□ -0.6
CCNE1-203ENST00000444983 YTHDF2Q9Y5A9 579 aaKnown RBP11.29□□□□□ -0.6
CCNE1-203ENST00000444983 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
CCNE1-203ENST00000444983 TFPI2P48307 235 aa11.28□□□□□ -0.6
CCNE1-203ENST00000444983 PPT1P50897 306 aa11.28□□□□□ -0.6
CCNE1-203ENST00000444983 RAB14P61106 215 aa11.28□□□□□ -0.6
CCNE1-203ENST00000444983 SAMD5Q5TGI4 173 aa11.28□□□□□ -0.6
CCNE1-203ENST00000444983 IGFL4Q6B9Z1 124 aa11.28□□□□□ -0.6
CCNE1-203ENST00000444983 CCDC28AQ8IWP9 274 aa11.28□□□□□ -0.6
CCNE1-203ENST00000444983 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
CCNE1-203ENST00000444983 EXOC3-AS1Q8N2X6 119 aa11.28□□□□□ -0.6
CCNE1-203ENST00000444983 DNHD1Q96M86 4753 aa11.28□□□□□ -0.6
CCNE1-203ENST00000444983 OR4C46A6NHA9 309 aa11.27□□□□□ -0.6
CCNE1-203ENST00000444983 GGTLC3B5MD39 225 aa11.27□□□□□ -0.6
CCNE1-203ENST00000444983 WFDC3Q8IUB2 231 aa11.27□□□□□ -0.6
CCNE1-203ENST00000444983 C16orf92Q96LL3 132 aa11.27□□□□□ -0.6
CCNE1-203ENST00000444983 C20orf173Q96LM9 149 aa11.27□□□□□ -0.6
CCNE1-203ENST00000444983 Q9H3A6 140 aa11.27□□□□□ -0.6
CCNE1-203ENST00000444983 CLEC5AQ9NY25 188 aa11.27□□□□□ -0.6
CCNE1-203ENST00000444983 NOTCH1P46531 2555 aa11.27□□□□□ -0.6
CCNE1-203ENST00000444983 PAGE4O60829 102 aa11.27□□□□□ -0.61
CCNE1-203ENST00000444983 HLA-DMBP28068 263 aa11.27□□□□□ -0.61
CCNE1-203ENST00000444983 GUCA2BQ16661 112 aa11.27□□□□□ -0.61
CCNE1-203ENST00000444983 RNF182Q8N6D2 247 aa11.27□□□□□ -0.61
CCNE1-203ENST00000444983 MANBALQ9NQG1 85 aa11.27□□□□□ -0.61
CCNE1-203ENST00000444983 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
CCNE1-203ENST00000444983 UBE2G2P60604 165 aa11.26□□□□□ -0.61
CCNE1-203ENST00000444983 FAM110AQ9BQ89 295 aa11.26□□□□□ -0.61
CCNE1-203ENST00000444983 NKX6-2Q9C056 277 aaPredicted RBP11.26□□□□□ -0.61
CCNE1-203ENST00000444983 OTORQ9NRC9 128 aa11.26□□□□□ -0.61
CCNE1-203ENST00000444983 C19orf73Q9NVV2 129 aa11.26□□□□□ -0.61
CCNE1-203ENST00000444983 G3V4G9 280 aa11.25□□□□□ -0.61
CCNE1-203ENST00000444983 M0R3E3 92 aa11.25□□□□□ -0.61
CCNE1-203ENST00000444983 BCL2P10415 239 aa11.25□□□□□ -0.61
CCNE1-203ENST00000444983 ID1P41134 155 aa11.25□□□□□ -0.61
CCNE1-203ENST00000444983 SUMO1P63165 101 aaKnown RBP11.25□□□□□ -0.61
CCNE1-203ENST00000444983 ICAM4Q14773 271 aa11.25□□□□□ -0.61
CCNE1-203ENST00000444983 PSG3Q16557 428 aa11.25□□□□□ -0.61
CCNE1-203ENST00000444983 ODF3L2Q3SX64 289 aa11.25□□□□□ -0.61
CCNE1-203ENST00000444983 AAMDCQ9H7C9 122 aa11.25□□□□□ -0.61
CCNE1-203ENST00000444983 PGPA6NDG6 321 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 ZNF688P0C7X2 276 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 KRTAP10-11P60412 298 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 SNRPD3P62318 126 aaKnown RBP11.24□□□□□ -0.61
CCNE1-203ENST00000444983 ARL6IP6Q8N6S5 226 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 MRPL53Q96EL3 112 aaKnown RBP11.24□□□□□ -0.61
CCNE1-203ENST00000444983 RARRES2Q99969 163 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 TXNDC17Q9BRA2 123 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 MAP6D1Q9H9H5 199 aa11.24□□□□□ -0.61
CCNE1-203ENST00000444983 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms