RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 LOXP28300 417 aaPredicted RBP8.55□□□□□ -1.04
TOP3B-210ENST00000444502 RHOGP84095 191 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 SLC25A48Q6ZT89 311 aaKnown RBP8.55□□□□□ -1.04
TOP3B-210ENST00000444502 RNASE7Q9H1E1 156 aaKnown RBP8.55□□□□□ -1.04
TOP3B-210ENST00000444502 COL5A1P20908 1838 aaPredicted RBP8.55□□□□□ -1.04
TOP3B-210ENST00000444502 DIAPH2-AS1Q14236 149 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 UTF1Q5T230 341 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 NPFFR1Q9GZQ6 430 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 JKAMPQ9P055 326 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 SS18L2Q9UHA2 77 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 A0A1W2PS18 150 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 P01737 135 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 PF4P02776 101 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 IL17RELQ6ZVW7 336 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 ODF3L1Q8IXM7 274 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 TEX29Q8N6K0 151 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 ZNF114Q8NC26 417 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 RNF114Q9Y508 228 aa8.55□□□□□ -1.04
TOP3B-210ENST00000444502 TSSC4Q9Y5U2 329 aaPredicted RBP8.55□□□□□ -1.04
TOP3B-210ENST00000444502 BUB1B-PAK6H3BSN5 160 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 NPFFO15130 113 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 NBEAP1P0C6P0 100 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 TMEM70Q9BUB7 260 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 SRRM4A7MD48 611 aaKnown RBP8.54□□□□□ -1.04
TOP3B-210ENST00000444502 FRMD6-AS1P0C7T7 363 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 ITLN2Q8WWU7 325 aaPredicted RBP8.54□□□□□ -1.04
TOP3B-210ENST00000444502 IL36BQ9NZH7 164 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 FAM90A9PA6NNJ1 464 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 H0YJW9 148 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 CFHR2P36980 270 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 GATA4P43694 442 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 VDAC2P45880 294 aaPredicted RBP8.54□□□□□ -1.04
TOP3B-210ENST00000444502 RPL15P61313 204 aaKnown RBP8.54□□□□□ -1.04
TOP3B-210ENST00000444502 SLAQ13239 276 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 GOLT1AQ6ZVE7 132 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
TOP3B-210ENST00000444502 HECTD1Q9ULT8 2610 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 LEPROTL1O95214 131 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 MSMBP08118 114 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 GNG5P63218 68 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 C11orf1Q9H5F2 150 aa8.54□□□□□ -1.04
TOP3B-210ENST00000444502 KIAA1549Q9HCM3 1950 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 TAX1BP3O14907 124 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 TYMSP04818 313 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 TMEM155Q4W5P6 130 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 FAM71F2Q6NXP2 309 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 YTHDF2Q9Y5A9 579 aaKnown RBP8.53□□□□□ -1.04
TOP3B-210ENST00000444502 OR5AL1P0C617 328 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 SRD5A1P18405 259 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 PRTN3P24158 256 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 CX3CL1P78423 397 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 TMEM78Q5T7P6 136 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 MTURNQ8N3F0 131 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 SSBP4Q9BWG4 385 aaPredicted RBP8.53□□□□□ -1.04
TOP3B-210ENST00000444502 BEX4Q9NWD9 120 aaPredicted RBP8.53□□□□□ -1.04
TOP3B-210ENST00000444502 CTSZQ9UBR2 303 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 HSPB8Q9UJY1 196 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 AREGP15514 252 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 GCSHP23434 173 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 CNTFRP26992 372 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 NMUP48645 174 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 CACNG8Q8WXS5 425 aa8.53□□□□□ -1.04
TOP3B-210ENST00000444502 PROP1O75360 226 aa8.52□□□□□ -1.04
TOP3B-210ENST00000444502 RPL7P18124 248 aaKnown RBP8.52□□□□□ -1.04
TOP3B-210ENST00000444502 COL6A3P12111 3177 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 DSCR9P59020 149 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 FOXL1Q12952 345 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 ZNF295-AS1Q8N0V1 137 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 MAP1LC3CQ9BXW4 147 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 PRSS22Q9GZN4 317 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 LSM4Q9Y4Z0 139 aaKnown RBP8.52□□□□□ -1.05
TOP3B-210ENST00000444502 FRYLO94915 3013 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 MT-ND6P03923 174 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 DLX6P56179 175 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 HSD52Q0P140 79 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 BVES-AS1Q5T3Y7 98 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 OR4X2Q8NGF9 303 aa8.52□□□□□ -1.05
TOP3B-210ENST00000444502 RNASE2P10153 161 aaKnown RBP8.51□□□□□ -1.05
TOP3B-210ENST00000444502 ATP5IP56385 69 aaPredicted RBP8.51□□□□□ -1.05
TOP3B-210ENST00000444502 BRWD1-AS2P59051 145 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 ZNF257Q9Y2Q1 563 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 HLA-DQA1P01909 254 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 C15orf32Q32M92 178 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 C2orf83Q53S99 150 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 PET117Q6UWS5 81 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 TEX45Q8NA69 505 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 OR8A1Q8NGG7 326 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 C19orf24Q9BVV8 132 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 MRPL32Q9BYC8 188 aaKnown RBP8.51□□□□□ -1.05
TOP3B-210ENST00000444502 TMEM14BQ9NUH8 114 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 HIST1H1AQ02539 215 aaPredicted RBP8.51□□□□□ -1.05
TOP3B-210ENST00000444502 GUSBP1Q15486 140 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 EBLN2Q6P2I7 272 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 Q8TCH9 128 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 LINC00479Q96M42 142 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 CITED1Q99966 193 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 A0A0G2JLM5 398 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 FAM181BA6NEQ2 426 aa8.51□□□□□ -1.05
TOP3B-210ENST00000444502 C5orf64Q2M2E5 130 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms