RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 NAA60Q9H7X0 242 aa8.21□□□□□ -1.1
SYNE2-206ENST00000441438 MAP1BP46821 2468 aaKnown RBP8.2□□□□□ -1.1
SYNE2-206ENST00000441438 A0A1B0GVT2 93 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 RBAKDNA6NC62 111 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 UMAD1C9J7I0 102 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 LINC01590Q5TEZ4 76 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 RNF126Q9BV68 326 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 FAM60AQ9NP50 221 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 LGALS9O00182 355 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 WFDC2Q14508 124 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 KTN1-AS1Q86SY8 53 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 Q8N976 141 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 OR2A5Q96R48 311 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 ZNF835Q9Y2P0 537 aa8.2□□□□□ -1.1
SYNE2-206ENST00000441438 OR51H1Q8NH63 302 aa8.19□□□□□ -1.1
SYNE2-206ENST00000441438 FAM3DQ96BQ1 224 aa8.19□□□□□ -1.1
SYNE2-206ENST00000441438 KIF26BQ2KJY2 2108 aa8.19□□□□□ -1.1
SYNE2-206ENST00000441438 PHF3Q92576 2039 aaKnown RBP8.19□□□□□ -1.1
SYNE2-206ENST00000441438 ZNF736B4DX44 427 aaPredicted RBP8.19□□□□□ -1.1
SYNE2-206ENST00000441438 TRACP01848 142 aa8.19□□□□□ -1.1
SYNE2-206ENST00000441438 FOLR3P41439 243 aa8.19□□□□□ -1.1
SYNE2-206ENST00000441438 TRBV7-6A0A0J9YX20 115 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 LOC100131303A0A0U1RQF7 123 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 SCRG1O75711 98 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 RNF182Q8N6D2 247 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 Q96M85 177 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 CSAG2Q9Y5P2 127 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 FREM3P0C091 2139 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 LINC00305Q7Z4B0 112 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 SH2D6Q7Z4S9 175 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 SHANK2-AS3Q9BTD1 123 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 OCIAD1Q9NX40 245 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 CACNA1EQ15878 2313 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 NDUFS5O43920 106 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 ERCC8Q13216 396 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 ZNF843Q8N446 348 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 LRRC29Q8WV35 223 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 RITA1Q96K30 269 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 CST11Q9H112 138 aa8.18□□□□□ -1.1
SYNE2-206ENST00000441438 OR10AC1Q8NH08 325 aa8.17□□□□□ -1.1
SYNE2-206ENST00000441438 TMEM242Q9NWH2 141 aa8.17□□□□□ -1.1
SYNE2-206ENST00000441438 F11RQ9Y624 299 aaKnown RBP8.17□□□□□ -1.1
SYNE2-206ENST00000441438 TRAV12-2A0A075B6T6 113 aa8.17□□□□□ -1.1
SYNE2-206ENST00000441438 A0A1B0GWA3 101 aa8.17□□□□□ -1.1
SYNE2-206ENST00000441438 DIRC3C9JPN6 131 aa8.17□□□□□ -1.1
SYNE2-206ENST00000441438 RPS18P62269 152 aaKnown RBP8.17□□□□□ -1.1
SYNE2-206ENST00000441438 RPP25LQ8N5L8 163 aaKnown RBP8.17□□□□□ -1.1
SYNE2-206ENST00000441438 RBMXL1Q96E39 390 aaKnown RBP8.17□□□□□ -1.1
SYNE2-206ENST00000441438 DSCR8Q96T75 97 aa8.17□□□□□ -1.1
SYNE2-206ENST00000441438 RNF114Q9Y508 228 aa8.17□□□□□ -1.1
SYNE2-206ENST00000441438 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 CBLN1P23435 193 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 ASIPP42127 132 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 ABCA11PQ4W5N1 156 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 AQP3Q92482 292 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 MAP6D1Q9H9H5 199 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 AHCTF1Q8WYP5 2266 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 ZFHX2Q9C0A1 2572 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-206ENST00000441438 H0YIZ8 118 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 EGR2P11161 476 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-206ENST00000441438 IGFBP7Q16270 282 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 LPAL2Q16609 132 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 KCNS1Q96KK3 526 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 SCRT1Q9BWW7 348 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 IGHV1OR15-9A0A0B4J2B8 117 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 HES3Q5TGS1 186 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 C17orf82Q86X59 251 aaPredicted RBP8.16□□□□□ -1.1
SYNE2-206ENST00000441438 SMDT1Q9H4I9 107 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 KLK13Q9UKR3 277 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 TMEM14AQ9Y6G1 99 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 GVINP1Q7Z2Y8 2422 aa8.16□□□□□ -1.1
SYNE2-206ENST00000441438 THADAQ6YHU6 1953 aa8.15□□□□□ -1.1
SYNE2-206ENST00000441438 C11orf98E9PRG8 122 aa8.15□□□□□ -1.1
SYNE2-206ENST00000441438 ZNF584Q8IVC4 421 aa8.15□□□□□ -1.1
SYNE2-206ENST00000441438 FLVCR1-AS1Q8TAF5 88 aa8.15□□□□□ -1.1
SYNE2-206ENST00000441438 DYSFO75923 2080 aa8.15□□□□□ -1.1
SYNE2-206ENST00000441438 CACNA1AO00555 2505 aa8.15□□□□□ -1.1
SYNE2-206ENST00000441438 TRAV1-1A0A0B4J248 108 aa8.15□□□□□ -1.11
SYNE2-206ENST00000441438 H0Y9J4 135 aa8.15□□□□□ -1.11
SYNE2-206ENST00000441438 VDAC1P21796 283 aa8.15□□□□□ -1.11
SYNE2-206ENST00000441438 MPV17LQ2QL34 196 aa8.15□□□□□ -1.11
SYNE2-206ENST00000441438 CLEC19AQ6UXS0 136 aa8.15□□□□□ -1.11
SYNE2-206ENST00000441438 HHLA3Q9XRX5 114 aa8.15□□□□□ -1.11
SYNE2-206ENST00000441438 OR2W1Q9Y3N9 320 aa8.15□□□□□ -1.11
SYNE2-206ENST00000441438 KNTC1P50748 2209 aa8.15□□□□□ -1.11
SYNE2-206ENST00000441438 GYPAP02724 150 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 IGHV4-31P0DP07 118 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 TMEM158Q8WZ71 300 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 DEFB127Q9H1M4 99 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 PLEKHA3Q9HB20 300 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 ZNF292O60281 2723 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 TRAV41A0A0B4J266 112 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 GATA2P23769 480 aaPredicted RBP8.14□□□□□ -1.11
SYNE2-206ENST00000441438 PMCHL1Q16048 86 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 C1orf100Q5SVJ3 147 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 C1orf140Q5VVS0 124 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 LINC00337Q8N6G1 96 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 FAM213BQ8TBF2 198 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 CHCHD5Q9BSY4 110 aa8.14□□□□□ -1.11
SYNE2-206ENST00000441438 COMMD5Q9GZQ3 224 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms