RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 LYPD1Q8N2G4 141 aa9.55□□□□□ -0.88
SCLT1-202ENST00000439369 SLC50A1Q9BRV3 221 aa9.55□□□□□ -0.88
SCLT1-202ENST00000439369 H3BQ15 152 aa9.54□□□□□ -0.88
SCLT1-202ENST00000439369 ISLRO14498 428 aa9.54□□□□□ -0.88
SCLT1-202ENST00000439369 HMGB3O15347 200 aaKnown RBP9.54□□□□□ -0.88
SCLT1-202ENST00000439369 PYYP10082 97 aa9.54□□□□□ -0.88
SCLT1-202ENST00000439369 TAGLN2P37802 199 aaKnown RBP9.54□□□□□ -0.88
SCLT1-202ENST00000439369 PSG9Q00887 426 aa9.54□□□□□ -0.88
SCLT1-202ENST00000439369 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.54□□□□□ -0.88
SCLT1-202ENST00000439369 DCANP1Q8TF63 244 aa9.54□□□□□ -0.88
SCLT1-202ENST00000439369 MS4A6AQ9H2W1 248 aa9.54□□□□□ -0.88
SCLT1-202ENST00000439369 ZNF586Q9NXT0 402 aa9.54□□□□□ -0.88
SCLT1-202ENST00000439369 K7EQG2 157 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 DNASE2O00115 360 aaPredicted RBP9.53□□□□□ -0.88
SCLT1-202ENST00000439369 NMBP08949 121 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 OR10J4P0C629 311 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 IGLL1P15814 213 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 ID1P41134 155 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 CMC4P56277 68 aaPredicted RBP9.53□□□□□ -0.88
SCLT1-202ENST00000439369 CLLU1Q5K131 121 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 C17orf77Q96MU5 243 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 FAM110AQ9BQ89 295 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 NKX6-2Q9C056 277 aaPredicted RBP9.53□□□□□ -0.88
SCLT1-202ENST00000439369 MANBALQ9NQG1 85 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 ZNF331Q9NQX6 463 aaPredicted RBP9.53□□□□□ -0.88
SCLT1-202ENST00000439369 PRELID1Q9Y255 219 aa9.53□□□□□ -0.88
SCLT1-202ENST00000439369 A0A1W2PRE2 83 aa9.52□□□□□ -0.89
SCLT1-202ENST00000439369 SOCS3O14543 225 aa9.52□□□□□ -0.89
SCLT1-202ENST00000439369 IFNA1P01562 189 aa9.52□□□□□ -0.89
SCLT1-202ENST00000439369 FGF8P55075 233 aaPredicted RBP9.52□□□□□ -0.89
SCLT1-202ENST00000439369 BEAN1Q3B7T3 259 aa9.52□□□□□ -0.89
SCLT1-202ENST00000439369 IQCF2Q8IXL9 164 aa9.52□□□□□ -0.89
SCLT1-202ENST00000439369 MRPL53Q96EL3 112 aaKnown RBP9.52□□□□□ -0.89
SCLT1-202ENST00000439369 AAMDCQ9H7C9 122 aa9.52□□□□□ -0.89
SCLT1-202ENST00000439369 WNK1Q9H4A3 2382 aa9.52□□□□□ -0.89
SCLT1-202ENST00000439369 EIF3GO75821 320 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCLT1-202ENST00000439369 NDUFB4O95168 129 aa9.51□□□□□ -0.89
SCLT1-202ENST00000439369 SNRPD3P62318 126 aaKnown RBP9.51□□□□□ -0.89
SCLT1-202ENST00000439369 C16orf92Q96LL3 132 aa9.51□□□□□ -0.89
SCLT1-202ENST00000439369 TXNDC17Q9BRA2 123 aa9.51□□□□□ -0.89
SCLT1-202ENST00000439369 TCEAL7Q9BRU2 100 aa9.51□□□□□ -0.89
SCLT1-202ENST00000439369 OTORQ9NRC9 128 aa9.51□□□□□ -0.89
SCLT1-202ENST00000439369 ZNF256Q9Y2P7 627 aaPredicted RBP9.51□□□□□ -0.89
SCLT1-202ENST00000439369 IZUMO1RA6ND01 250 aa9.5□□□□□ -0.89
SCLT1-202ENST00000439369 EGFEM1PQ0D2K5 195 aa9.5□□□□□ -0.89
SCLT1-202ENST00000439369 GUCA2BQ16661 112 aa9.5□□□□□ -0.89
SCLT1-202ENST00000439369 SAMD5Q5TGI4 173 aa9.5□□□□□ -0.89
SCLT1-202ENST00000439369 GBGT1Q8N5D6 347 aa9.5□□□□□ -0.89
SCLT1-202ENST00000439369 BLNKQ8WV28 456 aa9.5□□□□□ -0.89
SCLT1-202ENST00000439369 TMPRSS5Q9H3S3 457 aa9.5□□□□□ -0.89
SCLT1-202ENST00000439369 IGKV3-7A0A075B6H7 116 aa9.49□□□□□ -0.89
SCLT1-202ENST00000439369 FAM74A7A6NL05 159 aa9.49□□□□□ -0.89
SCLT1-202ENST00000439369 SLC17A3O00476 420 aa9.49□□□□□ -0.89
SCLT1-202ENST00000439369 NDUFS6O75380 124 aaKnown RBP9.49□□□□□ -0.89
SCLT1-202ENST00000439369 CCL20P78556 96 aa9.49□□□□□ -0.89
SCLT1-202ENST00000439369 RXFP4Q8TDU9 374 aa9.49□□□□□ -0.89
SCLT1-202ENST00000439369 Q9H3A6 140 aa9.49□□□□□ -0.89
SCLT1-202ENST00000439369 GNG13Q9P2W3 67 aa9.49□□□□□ -0.89
SCLT1-202ENST00000439369 TRAV8-2A0A0B4J237 113 aa9.48□□□□□ -0.89
SCLT1-202ENST00000439369 A0A1B0GV50 99 aa9.48□□□□□ -0.89
SCLT1-202ENST00000439369 BCL2P10415 239 aa9.48□□□□□ -0.89
SCLT1-202ENST00000439369 TFPI2P48307 235 aa9.48□□□□□ -0.89
SCLT1-202ENST00000439369 RANP62826 216 aaKnown RBP9.48□□□□□ -0.89
SCLT1-202ENST00000439369 PSG3Q16557 428 aa9.48□□□□□ -0.89
SCLT1-202ENST00000439369 C5orf17Q8NAS9 161 aa9.48□□□□□ -0.89
SCLT1-202ENST00000439369 SERTM2A0A1B0GWG4 89 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 H3BTX0 84 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 PAGE4O60829 102 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 CSN1S1P47710 185 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 ICAM4Q14773 271 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 OXLD1Q5BKU9 147 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 GTSCR1Q86UQ5 136 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 WFDC3Q8IUB2 231 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 MED9Q9NWA0 146 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 VAX2Q9UIW0 290 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 YTHDF2Q9Y5A9 579 aaKnown RBP9.47□□□□□ -0.89
SCLT1-202ENST00000439369 SELENOKQ9Y6D0 94 aa9.47□□□□□ -0.89
SCLT1-202ENST00000439369 LOC102723971A0A1B0GUV8 181 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 PGPA6NDG6 321 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 RBFOX3A6NFN3 312 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 OR11H12B2RN74 326 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 GGTLC3B5MD39 225 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 SNRPCP09234 159 aaKnown RBP9.46□□□□□ -0.9
SCLT1-202ENST00000439369 ZNF688P0C7X2 276 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 SUMO1P63165 101 aaKnown RBP9.46□□□□□ -0.9
SCLT1-202ENST00000439369 MEF2BQ02080 365 aaPredicted RBP9.46□□□□□ -0.9
SCLT1-202ENST00000439369 ZNF506Q5JVG8 444 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 KPRPQ5T749 579 aaPredicted RBP9.46□□□□□ -0.9
SCLT1-202ENST00000439369 CST9LP1Q5W188 147 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 CCDC28AQ8IWP9 274 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 EXOC3-AS1Q8N2X6 119 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 CMTM2Q8TAZ6 248 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 SMDT1Q9H4I9 107 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.9
SCLT1-202ENST00000439369 VWFP04275 2813 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 RBAKDNA6NC62 111 aa9.45□□□□□ -0.9
SCLT1-202ENST00000439369 FBLL1A6NHQ2 334 aaKnown RBP9.45□□□□□ -0.9
SCLT1-202ENST00000439369 C11orf94C9JXX5 98 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms