RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 PMS2P11Q13670 270 aa15.63■□□□□ 0.09
CHD3-204ENST00000439235 C9orf66Q5T8R8 295 aa15.63■□□□□ 0.09
CHD3-204ENST00000439235 RBPMS2Q6ZRY4 209 aaKnown RBP15.63■□□□□ 0.09
CHD3-204ENST00000439235 WFDC9Q8NEX5 89 aa15.63■□□□□ 0.09
CHD3-204ENST00000439235 OR2K2Q8NGT1 345 aa15.63■□□□□ 0.09
CHD3-204ENST00000439235 TRAV25A0A0B4J276 109 aa15.62■□□□□ 0.09
CHD3-204ENST00000439235 SNRPCP09234 159 aaKnown RBP15.62■□□□□ 0.09
CHD3-204ENST00000439235 TAGLN2P37802 199 aaKnown RBP15.62■□□□□ 0.09
CHD3-204ENST00000439235 PAFAH1B2P68402 229 aa15.62■□□□□ 0.09
CHD3-204ENST00000439235 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.62■□□□□ 0.09
CHD3-204ENST00000439235 SLC50A1Q9BRV3 221 aa15.62■□□□□ 0.09
CHD3-204ENST00000439235 SELENOKQ9Y6D0 94 aa15.62■□□□□ 0.09
CHD3-204ENST00000439235 H3BTX0 84 aa15.61■□□□□ 0.09
CHD3-204ENST00000439235 IGKV3-7A0A075B6H7 116 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 A0A1W2PRE2 83 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 TSPAN4O14817 238 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 IGLV1-51P01701 117 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 UBE2G2P60604 165 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 PSG9Q00887 426 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 CD300EQ496F6 205 aaPredicted RBP15.6■□□□□ 0.09
CHD3-204ENST00000439235 TMEM61Q8N0U2 210 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 LYPD1Q8N2G4 141 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 C17orf77Q96MU5 243 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 GPR61Q9BZJ8 451 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 MS4A6AQ9H2W1 248 aa15.6■□□□□ 0.09
CHD3-204ENST00000439235 TRAV2A0A0B4J234 112 aa15.59■□□□□ 0.09
CHD3-204ENST00000439235 DNASE2O00115 360 aaPredicted RBP15.59■□□□□ 0.09
CHD3-204ENST00000439235 PAGE4O60829 102 aa15.59■□□□□ 0.09
CHD3-204ENST00000439235 BCL2P10415 239 aa15.59■□□□□ 0.09
CHD3-204ENST00000439235 LCN12Q6JVE5 192 aa15.59■□□□□ 0.09
CHD3-204ENST00000439235 FAM210AQ96ND0 272 aa15.59■□□□□ 0.09
CHD3-204ENST00000439235 NKX6-2Q9C056 277 aaPredicted RBP15.59■□□□□ 0.09
CHD3-204ENST00000439235 AAMDCQ9H7C9 122 aa15.59■□□□□ 0.09
CHD3-204ENST00000439235 FAM74A7A6NL05 159 aa15.58■□□□□ 0.08
CHD3-204ENST00000439235 SLC17A3O00476 420 aa15.58■□□□□ 0.08
CHD3-204ENST00000439235 NDUFB4O95168 129 aa15.58■□□□□ 0.08
CHD3-204ENST00000439235 RANP62826 216 aaKnown RBP15.58■□□□□ 0.08
CHD3-204ENST00000439235 HAGHQ16775 308 aa15.58■□□□□ 0.08
CHD3-204ENST00000439235 GBGT1Q8N5D6 347 aa15.58■□□□□ 0.08
CHD3-204ENST00000439235 C16orf92Q96LL3 132 aa15.58■□□□□ 0.08
CHD3-204ENST00000439235 SPAG8Q99932 426 aaPredicted RBP15.58■□□□□ 0.08
CHD3-204ENST00000439235 Q9H3A6 140 aa15.58■□□□□ 0.08
CHD3-204ENST00000439235 ZNF331Q9NQX6 463 aaPredicted RBP15.58■□□□□ 0.08
CHD3-204ENST00000439235 MED9Q9NWA0 146 aa15.58■□□□□ 0.08
CHD3-204ENST00000439235 CLEC5AQ9NY25 188 aa15.58■□□□□ 0.08
CHD3-204ENST00000439235 YTHDF2Q9Y5A9 579 aaKnown RBP15.58■□□□□ 0.08
CHD3-204ENST00000439235 LOC102723971A0A1B0GUV8 181 aa15.57■□□□□ 0.08
CHD3-204ENST00000439235 RBFOX3A6NFN3 312 aa15.57■□□□□ 0.08
CHD3-204ENST00000439235 PRR31Q5SQ13 230 aa15.57■□□□□ 0.08
CHD3-204ENST00000439235 CST9LP1Q5W188 147 aa15.57■□□□□ 0.08
CHD3-204ENST00000439235 DCANP1Q8TF63 244 aa15.57■□□□□ 0.08
CHD3-204ENST00000439235 TXNDC17Q9BRA2 123 aa15.57■□□□□ 0.08
CHD3-204ENST00000439235 OTORQ9NRC9 128 aa15.57■□□□□ 0.08
CHD3-204ENST00000439235 VAX2Q9UIW0 290 aa15.57■□□□□ 0.08
CHD3-204ENST00000439235 TENM1Q9UKZ4 2725 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 LINC00862A6NCI5 91 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 OR4C46A6NHA9 309 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 K7EQG2 157 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 ISLRO14498 428 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 SOCS3O14543 225 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 ID1P41134 155 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 TFPI2P48307 235 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 TOR2AQ5JU69 321 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 WFDC3Q8IUB2 231 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 PRELID1Q9Y255 219 aa15.56■□□□□ 0.08
CHD3-204ENST00000439235 GGTLC3B5MD39 225 aa15.55■□□□□ 0.08
CHD3-204ENST00000439235 C11orf94C9JXX5 98 aa15.55■□□□□ 0.08
CHD3-204ENST00000439235 GUCA2BQ16661 112 aa15.55■□□□□ 0.08
CHD3-204ENST00000439235 ZNF506Q5JVG8 444 aa15.55■□□□□ 0.08
CHD3-204ENST00000439235 EIF5A2Q9GZV4 153 aaKnown RBP15.55■□□□□ 0.08
CHD3-204ENST00000439235 RAB19A4D1S5 217 aa15.54■□□□□ 0.08
CHD3-204ENST00000439235 PGPA6NDG6 321 aa15.54■□□□□ 0.08
CHD3-204ENST00000439235 IGLL1P15814 213 aa15.54■□□□□ 0.08
CHD3-204ENST00000439235 ATP5G3P48201 142 aa15.54■□□□□ 0.08
CHD3-204ENST00000439235 MEF2BQ02080 365 aaPredicted RBP15.54■□□□□ 0.08
CHD3-204ENST00000439235 ICAM4Q14773 271 aa15.54■□□□□ 0.08
CHD3-204ENST00000439235 EXOC3-AS1Q8N2X6 119 aa15.54■□□□□ 0.08
CHD3-204ENST00000439235 MRPL53Q96EL3 112 aaKnown RBP15.54■□□□□ 0.08
CHD3-204ENST00000439235 TCEAL7Q9BRU2 100 aa15.54■□□□□ 0.08
CHD3-204ENST00000439235 TRAV8-2A0A0B4J237 113 aa15.53■□□□□ 0.08
CHD3-204ENST00000439235 IZUMO1RA6ND01 250 aa15.53■□□□□ 0.08
CHD3-204ENST00000439235 SNRPD3P62318 126 aaKnown RBP15.53■□□□□ 0.08
CHD3-204ENST00000439235 SUMO1P63165 101 aaKnown RBP15.53■□□□□ 0.08
CHD3-204ENST00000439235 COMMD7Q86VX2 200 aa15.53■□□□□ 0.08
CHD3-204ENST00000439235 C5orf17Q8NAS9 161 aa15.53■□□□□ 0.08
CHD3-204ENST00000439235 CMTM2Q8TAZ6 248 aa15.53■□□□□ 0.08
CHD3-204ENST00000439235 RXFP4Q8TDU9 374 aa15.53■□□□□ 0.08
CHD3-204ENST00000439235 WIPF1O43516 503 aa15.52■□□□□ 0.08
CHD3-204ENST00000439235 SLC25A5P05141 298 aaKnown RBP15.52■□□□□ 0.08
CHD3-204ENST00000439235 CSN1S1P47710 185 aa15.52■□□□□ 0.08
CHD3-204ENST00000439235 PEA15Q15121 130 aa15.52■□□□□ 0.08
CHD3-204ENST00000439235 RARRES2Q99969 163 aa15.52■□□□□ 0.08
CHD3-204ENST00000439235 PDE6DO43924 150 aa15.51■□□□□ 0.07
CHD3-204ENST00000439235 PSG3Q16557 428 aa15.51■□□□□ 0.07
CHD3-204ENST00000439235 ARL6IP6Q8N6S5 226 aa15.51■□□□□ 0.07
CHD3-204ENST00000439235 SMDT1Q9H4I9 107 aa15.51■□□□□ 0.07
CHD3-204ENST00000439235 F6UZH7 168 aa15.5■□□□□ 0.07
CHD3-204ENST00000439235 NDUFS6O75380 124 aaKnown RBP15.5■□□□□ 0.07
CHD3-204ENST00000439235 ZNF688P0C7X2 276 aa15.5■□□□□ 0.07
CHD3-204ENST00000439235 HLA-DMBP28068 263 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms