RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 GPR183P32249 361 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 OR10J3Q5JRS4 329 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 PVRIGQ6DKI7 326 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 TEX45Q8NA69 505 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 ZFHX3Q15911 3703 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 CD24P25063 80 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 FOXA3P55318 350 aaPredicted RBP8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 CDSNQ15517 529 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 PPP1R27Q86WC6 154 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 TMEM116Q8NCL8 245 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 OR10AG1Q8NH19 301 aa8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 ZNF48Q96MX3 618 aaPredicted RBP8.28□□□□□ -1.08
CLSTN1-203ENST00000435891 HIGD1CA8MV81 97 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 HLA-DQA1P01909 254 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 GP9P14770 177 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 TM4SF20Q53R12 229 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 KIR3DL3Q8N743 410 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 COL6A6A6NMZ7 2263 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 TRAV8-1A0A0A6YYK1 113 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 FAM90A27PA6NNH2 459 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 TCF24Q7RTU0 167 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 C18orf32Q8TCD1 76 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 TRGV9Q99603 122 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 TSSC4Q9Y5U2 329 aaPredicted RBP8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 SPTBN1Q01082 2364 aaKnown RBP8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 SERTM2A0A1B0GWG4 89 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 B9A039 149 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 CD3EP07766 207 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 NBL1P41271 181 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 FAM231DQ6ZW35 169 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 ASCL2Q99929 193 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 NGBQ9NPG2 151 aa8.27□□□□□ -1.09
CLSTN1-203ENST00000435891 WNK2Q9Y3S1 2297 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 J3QR89 54 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 CSN3P07498 182 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 SCNM1Q9BWG6 230 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 HSD52Q0P140 79 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 SRSF12Q8WXF0 261 aaKnown RBP8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 ST20Q9HBF5 79 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 F11RQ9Y624 299 aaKnown RBP8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 CACNA1BQ00975 2339 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 TEX48A0A1B0GUV7 120 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 LEPROTL1O95214 131 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 LYZP61626 148 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 GRAMD2BQ96HH9 432 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 MLST8Q9BVC4 326 aa8.26□□□□□ -1.09
CLSTN1-203ENST00000435891 A6NDN8 102 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 Q9H3A6 140 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 KLF12Q9Y4X4 402 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 EXOC3-AS1Q8N2X6 119 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 GTSF1Q8WW33 167 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 RPEQ96AT9 228 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 S4R3C0 116 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 K7ENP7 123 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 GPR82Q96P67 336 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 VKORC1Q9BQB6 163 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 AKAP6Q13023 2319 aa8.25□□□□□ -1.09
CLSTN1-203ENST00000435891 A0A0G2JLM5 398 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 I3L2K1 104 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 TIMM23O14925 209 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 ZNF672Q499Z4 452 aaPredicted RBP8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 TMEM97Q5BJF2 176 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 KLF17Q5JT82 389 aaPredicted RBP8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 C8orf46Q8TAG6 207 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 WIPF2Q8TF74 440 aaPredicted RBP8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 C17orf77Q96MU5 243 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 ONECUT1Q9UBC0 465 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 IGKV1-17P01599 117 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 TCRAP04437 139 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 FABP2P12104 132 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 HIST1H1AQ02539 215 aaPredicted RBP8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 COX19Q49B96 90 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 BCL6BQ8N143 479 aaPredicted RBP8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 GEMIN7Q9H840 131 aaKnown RBP8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 A0A1W2PRD5 423 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 A0A1W2PRF3 423 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 A0A1W2PRM7 423 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 RBP4P02753 201 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 PLGLAQ15195 96 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 LINC00173Q6ZV60 143 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 CELSR1Q9NYQ6 3014 aa8.24□□□□□ -1.09
CLSTN1-203ENST00000435891 COL12A1Q99715 3063 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 LY6LH3BQJ8 138 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 KLRD1Q13241 179 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 CIARTQ8N365 385 aaPredicted RBP8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 SLC25A39Q9BZJ4 359 aaPredicted RBP8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 SPTBN4Q9H254 2564 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 VPS13CQ709C8 3753 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 A0A1B0GXF2 115 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 LTAP01374 205 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 PET117Q6UWS5 81 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 URB1-AS1Q96HZ7 61 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 PRSS22Q9GZN4 317 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 SS18L2Q9UHA2 77 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 GAGE12HA6NDE8 117 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 ZNF785A8K8V0 405 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 MAP1LC3CQ9BXW4 147 aa8.23□□□□□ -1.09
CLSTN1-203ENST00000435891 K7EIM0 57 aa8.22□□□□□ -1.09
CLSTN1-203ENST00000435891 PRSS57Q6UWY2 283 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms