RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SPANXA1Q9NS26 97 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 H0YJW9 148 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 I3L3M4 83 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 GREB1Q4ZG55 1949 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 GAGE12BA1L429 117 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 GAGE7O76087 117 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 NDUFB8O95169 186 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 GAGE12FP0CL80 117 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 GAGE12GP0CL81 117 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 GAGE12IP0CL82 117 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 NDUFAF3Q9BU61 184 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 SCRT2Q9NQ03 307 aa9.14□□□□□ -0.95
SCN4A-201ENST00000435607 DOCK4Q8N1I0 1966 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 IGKV1D-43A0A0B4J1Z2 117 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 PRSS29PA6NIE9 313 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 CD55P08174 381 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 C9orf66Q5T8R8 295 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 DEPPQ9NTK1 212 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 IGF2BP2-AS1Q96M15 143 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 A0A1B0GUS0 222 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 Q6ZS92 163 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 PFN2P35080 140 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 ZNF503Q96F45 646 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 GREM1O60565 184 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 NCR2O95944 276 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 NHLRC3Q5JS37 347 aa9.13□□□□□ -0.95
SCN4A-201ENST00000435607 PFN1P07737 140 aaKnown RBP9.12□□□□□ -0.95
SCN4A-201ENST00000435607 GAS1P54826 345 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 USF3Q68DE3 2245 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 SPANXDQ9BXN6 97 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 LY75O60449 1722 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 OCC1Q8TAD7 63 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 WDR83OSQ9Y284 106 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 EFNA2O43921 213 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 PCP4P48539 62 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 SRSF2Q01130 221 aaKnown RBP9.12□□□□□ -0.95
SCN4A-201ENST00000435607 XIRP1Q702N8 1843 aaKnown RBP9.12□□□□□ -0.95
SCN4A-201ENST00000435607 LINC00518Q8N0U6 118 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 EGR2P11161 476 aaPredicted RBP9.12□□□□□ -0.95
SCN4A-201ENST00000435607 ADAMTSL1Q8N6G6 1762 aa9.12□□□□□ -0.95
SCN4A-201ENST00000435607 SH2D6Q7Z4S9 175 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 TNS1Q9HBL0 1735 aaKnown RBP9.11□□□□□ -0.95
SCN4A-201ENST00000435607 A0A1B0GTI1 187 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 C1orf43Q9BWL3 253 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 IGKV1OR2-108A0A075B7D4 117 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 IGKV1D-13A0A0B4J2D9 117 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 C1QTNF9P0C862 333 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 IGKV1-13P0DP09 117 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 PAX9P55771 341 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 SPINK13Q1W4C9 94 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 PCNX1Q96RV3 2341 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 RIF1Q5UIP0 2472 aaKnown RBP9.11□□□□□ -0.95
SCN4A-201ENST00000435607 GAGE6Q13070 117 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 NDUFB1O75438 58 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 PLCE1Q9P212 2302 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 TRAV5A0A0B4J249 113 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 DKK1O94907 266 aa9.11□□□□□ -0.95
SCN4A-201ENST00000435607 SELLP14151 372 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 COL8A2P25067 703 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 DMRTC2Q8IXT2 367 aaPredicted RBP9.1□□□□□ -0.95
SCN4A-201ENST00000435607 BCL6BQ8N143 479 aaPredicted RBP9.1□□□□□ -0.95
SCN4A-201ENST00000435607 CARHSP1Q9Y2V2 147 aaKnown RBP9.1□□□□□ -0.95
SCN4A-201ENST00000435607 PINLYPA6NC86 204 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 TREML4Q6UXN2 200 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 C10orf55Q5SWW7 151 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 ROS1P08922 2347 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 TRAV13-2A0A0B4J235 113 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 CDKN1BP46527 198 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 IGHV1OR15-1A0A075B7D0 117 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 RUSC1-AS1Q66K80 236 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 GAFA1Q96PS6 74 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 TM2D2Q9BX73 214 aa9.1□□□□□ -0.95
SCN4A-201ENST00000435607 IGHV1-24A0A0C4DH33 117 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 IGKV1-5P01602 117 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 HAMPP81172 84 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 REG4Q9BYZ8 158 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 RALGAPA2Q2PPJ7 1873 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 Q8TAT8 98 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 ZNF319Q9P2F9 582 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 IGHV2-70DA0A0C4DH43 119 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 TFF1P04155 84 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 IGHV3-16A0A0C4DH30 117 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 C1orf194Q5T5A4 169 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 MRPL27Q9P0M9 148 aaKnown RBP9.09□□□□□ -0.95
SCN4A-201ENST00000435607 CD300CQ08708 224 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 MAPK1IP1LQ8NDC0 245 aa9.09□□□□□ -0.95
SCN4A-201ENST00000435607 FNDC10F2Z333 226 aa9.09□□□□□ -0.96
SCN4A-201ENST00000435607 ARMS2P0C7Q2 107 aa9.09□□□□□ -0.96
SCN4A-201ENST00000435607 BRCA1P38398 1863 aaKnown RBP9.09□□□□□ -0.96
SCN4A-201ENST00000435607 RHOHQ15669 191 aa9.09□□□□□ -0.96
SCN4A-201ENST00000435607 C1orf122Q6ZSJ8 110 aa9.09□□□□□ -0.96
SCN4A-201ENST00000435607 ZNRF2Q8NHG8 242 aa9.09□□□□□ -0.96
SCN4A-201ENST00000435607 ETDCA0A1B0GVM5 59 aa9.08□□□□□ -0.96
SCN4A-201ENST00000435607 E7EQL1 145 aa9.08□□□□□ -0.96
SCN4A-201ENST00000435607 TMEM258P61165 79 aa9.08□□□□□ -0.96
SCN4A-201ENST00000435607 TIRAPP58753 221 aa9.08□□□□□ -0.96
SCN4A-201ENST00000435607 STPG4Q8N801 248 aa9.08□□□□□ -0.96
SCN4A-201ENST00000435607 HEATR5AQ86XA9 2040 aa9.08□□□□□ -0.96
SCN4A-201ENST00000435607 ELANEP08246 267 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms