RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 RBX1P62877 108 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 VMO1Q7Z5L0 202 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 CIARTQ8N365 385 aaPredicted RBP12.37□□□□□ -0.43
SCARF1-203ENST00000434376 A1L4Q6 167 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 IGLV1-47P01700 117 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 PRB1P04280 392 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 FAM120AOSQ5T036 256 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 OR4C46A6NHA9 309 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 HIGD1CA8MV81 97 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 J3KRW8 73 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 ESDP10768 282 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 LY6EQ16553 131 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 LINC00173Q6ZV60 143 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 NF1P21359 2839 aa12.37□□□□□ -0.43
SCARF1-203ENST00000434376 AARDQ4LEZ3 155 aa12.36□□□□□ -0.43
SCARF1-203ENST00000434376 ORAOV1Q8WV07 137 aa12.36□□□□□ -0.43
SCARF1-203ENST00000434376 PGLYRP4Q96LB8 373 aa12.36□□□□□ -0.43
SCARF1-203ENST00000434376 TRAV9-2A0A087WT02 112 aa12.36□□□□□ -0.43
SCARF1-203ENST00000434376 PEX7O00628 323 aa12.36□□□□□ -0.43
SCARF1-203ENST00000434376 TRAV9-1A0A075B6T8 112 aa12.36□□□□□ -0.43
SCARF1-203ENST00000434376 MRPL52Q86TS9 123 aaKnown RBP12.36□□□□□ -0.43
SCARF1-203ENST00000434376 OR1L4Q8NGR5 311 aa12.36□□□□□ -0.43
SCARF1-203ENST00000434376 NAA38Q9BRA0 125 aaKnown RBP12.36□□□□□ -0.43
SCARF1-203ENST00000434376 OSTCQ9NRP0 149 aa12.36□□□□□ -0.43
SCARF1-203ENST00000434376 JMJD1CQ15652 2540 aa12.35□□□□□ -0.43
SCARF1-203ENST00000434376 HSBP1L1C9JCN9 74 aa12.35□□□□□ -0.43
SCARF1-203ENST00000434376 NDPQ00604 133 aa12.35□□□□□ -0.43
SCARF1-203ENST00000434376 NUP35Q8NFH5 326 aa12.35□□□□□ -0.43
SCARF1-203ENST00000434376 TEX15Q9BXT5 2789 aa12.35□□□□□ -0.43
SCARF1-203ENST00000434376 IZUMO1RA6ND01 250 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 CACNG8Q8WXS5 425 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 PERPQ96FX8 193 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 HIGD1AQ9Y241 93 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 TNFRSF13BO14836 293 aaPredicted RBP12.34□□□□□ -0.43
SCARF1-203ENST00000434376 AMMECR1LQ6DCA0 310 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 DAZAP1Q96EP5 407 aaKnown RBP12.34□□□□□ -0.43
SCARF1-203ENST00000434376 Q9H3A6 140 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 LINC00574Q9H8X3 128 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 KAAG1Q9UBP8 84 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 G3V318 75 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 MRGPRG-AS1Q2M3A8 158 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 NUDT10Q8NFP7 164 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 NUDT11Q96G61 164 aa12.34□□□□□ -0.43
SCARF1-203ENST00000434376 LINC01548A6NM66 108 aa12.33□□□□□ -0.44
SCARF1-203ENST00000434376 GDF5OSQ5U4N7 250 aa12.33□□□□□ -0.44
SCARF1-203ENST00000434376 LCNL1Q6ZST4 164 aa12.33□□□□□ -0.44
SCARF1-203ENST00000434376 SPATA12Q7Z6I5 190 aa12.33□□□□□ -0.44
SCARF1-203ENST00000434376 C11orf52Q96A22 123 aa12.33□□□□□ -0.44
SCARF1-203ENST00000434376 FXYD5Q96DB9 178 aa12.33□□□□□ -0.44
SCARF1-203ENST00000434376 NBR2O15453 112 aa12.33□□□□□ -0.44
SCARF1-203ENST00000434376 SAPCD1Q5SSQ6 148 aa12.33□□□□□ -0.44
SCARF1-203ENST00000434376 LINC00322Q6ZN03 302 aaPredicted RBP12.33□□□□□ -0.44
SCARF1-203ENST00000434376 FBN2P35556 2912 aa12.33□□□□□ -0.44
SCARF1-203ENST00000434376 A0A087X0K7 114 aa12.32□□□□□ -0.44
SCARF1-203ENST00000434376 ZNF329Q86UD4 541 aa12.32□□□□□ -0.44
SCARF1-203ENST00000434376 TMEM70Q9BUB7 260 aa12.32□□□□□ -0.44
SCARF1-203ENST00000434376 F11RQ9Y624 299 aaKnown RBP12.32□□□□□ -0.44
SCARF1-203ENST00000434376 HLA-DMBP28068 263 aa12.32□□□□□ -0.44
SCARF1-203ENST00000434376 NCOR1P1Q9H4R4 102 aa12.32□□□□□ -0.44
SCARF1-203ENST00000434376 PRRC2AP48634 2157 aaKnown RBP12.32□□□□□ -0.44
SCARF1-203ENST00000434376 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
SCARF1-203ENST00000434376 GPR183P32249 361 aa12.32□□□□□ -0.44
SCARF1-203ENST00000434376 UCNP55089 124 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 CHD6Q8TD26 2715 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 COL8A1P27658 744 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 TEX45Q8NA69 505 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 HIVEP2P31629 2446 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 IGLV2-8P01709 118 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 TMEM249Q2WGJ8 235 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 Q8TAT8 98 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 SLC25A39Q9BZJ4 359 aaPredicted RBP12.31□□□□□ -0.44
SCARF1-203ENST00000434376 EPDR1Q9UM22 224 aa12.31□□□□□ -0.44
SCARF1-203ENST00000434376 CHEK1O14757 476 aa12.3□□□□□ -0.44
SCARF1-203ENST00000434376 IGKV1-17P01599 117 aa12.3□□□□□ -0.44
SCARF1-203ENST00000434376 HECTD1Q9ULT8 2610 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 SMIM27A0A1W2PRY6 76 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 RIPPLY3P57055 190 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 LINC00311Q8N616 119 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 MRPS16Q9Y3D3 137 aaKnown RBP12.29□□□□□ -0.44
SCARF1-203ENST00000434376 A0A1W2PRE2 83 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 IGLC1P0CG04 106 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 COX19Q49B96 90 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 SLC25A34Q6PIV7 304 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 TMEM116Q8NCL8 245 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 CEACAM3P40198 252 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 FXYD7P58549 80 aa12.29□□□□□ -0.44
SCARF1-203ENST00000434376 SAA4P35542 130 aa12.28□□□□□ -0.44
SCARF1-203ENST00000434376 ARL6IP6Q8N6S5 226 aa12.28□□□□□ -0.44
SCARF1-203ENST00000434376 CHODLQ9H9P2 273 aa12.28□□□□□ -0.44
SCARF1-203ENST00000434376 LY96Q9Y6Y9 160 aa12.28□□□□□ -0.44
SCARF1-203ENST00000434376 SERTM2A0A1B0GWG4 89 aa12.28□□□□□ -0.44
SCARF1-203ENST00000434376 P01737 135 aa12.28□□□□□ -0.44
SCARF1-203ENST00000434376 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
SCARF1-203ENST00000434376 ARPC1AQ92747 370 aa12.28□□□□□ -0.44
SCARF1-203ENST00000434376 AP1S3Q96PC3 154 aa12.28□□□□□ -0.44
SCARF1-203ENST00000434376 IGKV2-40A0A087WW87 121 aaPredicted RBP12.27□□□□□ -0.44
SCARF1-203ENST00000434376 IGKV2D-40P01614 121 aaPredicted RBP12.27□□□□□ -0.44
SCARF1-203ENST00000434376 IGHV3-11P01762 117 aa12.27□□□□□ -0.44
SCARF1-203ENST00000434376 C5orf64Q2M2E5 130 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms