RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ADAP1O75689 374 aa10.37□□□□□ -0.75
PRKDC-203ENST00000432581 OR5G3P0C626 314 aa10.37□□□□□ -0.75
PRKDC-203ENST00000432581 LINC00869P0C866 280 aa10.37□□□□□ -0.75
PRKDC-203ENST00000432581 PPP1R1AQ13522 171 aa10.37□□□□□ -0.75
PRKDC-203ENST00000432581 SPATA12Q7Z6I5 190 aa10.37□□□□□ -0.75
PRKDC-203ENST00000432581 RNASE8Q8TDE3 154 aaKnown RBP10.37□□□□□ -0.75
PRKDC-203ENST00000432581 DEDD2Q8WXF8 326 aa10.37□□□□□ -0.75
PRKDC-203ENST00000432581 TRIM63Q969Q1 353 aa10.37□□□□□ -0.75
PRKDC-203ENST00000432581 ZNF503Q96F45 646 aa10.37□□□□□ -0.75
PRKDC-203ENST00000432581 C20orf144Q9BQM9 153 aa10.37□□□□□ -0.75
PRKDC-203ENST00000432581 SLIRPQ9GZT3 109 aaKnown RBP10.37□□□□□ -0.75
PRKDC-203ENST00000432581 NOP10Q9NPE3 64 aaKnown RBP10.37□□□□□ -0.75
PRKDC-203ENST00000432581 DNAH5Q8TE73 4624 aa10.36□□□□□ -0.75
PRKDC-203ENST00000432581 CXCL2P19875 107 aa10.36□□□□□ -0.75
PRKDC-203ENST00000432581 RPUSD4Q96CM3 377 aaKnown RBP10.36□□□□□ -0.75
PRKDC-203ENST00000432581 GNPNAT1Q96EK6 184 aaPredicted RBP10.36□□□□□ -0.75
PRKDC-203ENST00000432581 UHRF2Q96PU4 802 aa10.36□□□□□ -0.75
PRKDC-203ENST00000432581 BTF3P20290 206 aaKnown RBP10.35□□□□□ -0.75
PRKDC-203ENST00000432581 M6PRP20645 277 aa10.35□□□□□ -0.75
PRKDC-203ENST00000432581 UBE2MP61081 183 aaKnown RBP10.35□□□□□ -0.75
PRKDC-203ENST00000432581 ID3Q02535 119 aa10.35□□□□□ -0.75
PRKDC-203ENST00000432581 OR5I1Q13606 314 aa10.35□□□□□ -0.75
PRKDC-203ENST00000432581 PYDC2Q56P42 97 aa10.35□□□□□ -0.75
PRKDC-203ENST00000432581 MCFD2Q8NI22 146 aa10.35□□□□□ -0.75
PRKDC-203ENST00000432581 RXFP4Q8TDU9 374 aa10.35□□□□□ -0.75
PRKDC-203ENST00000432581 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
PRKDC-203ENST00000432581 Q9H3A6 140 aa10.35□□□□□ -0.75
PRKDC-203ENST00000432581 PSENENQ9NZ42 101 aa10.35□□□□□ -0.75
PRKDC-203ENST00000432581 TRAV26-1A0A087WT03 109 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 A0A1W2PPQ1 181 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 FNDC10F2Z333 226 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 K7EPK0 472 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 NOL3O60936 208 aaKnown RBP10.34□□□□□ -0.75
PRKDC-203ENST00000432581 ANXA7P20073 488 aaKnown RBP10.34□□□□□ -0.75
PRKDC-203ENST00000432581 POLR2GP62487 172 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRKDC-203ENST00000432581 DLK1P80370 383 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 PXDC1Q5TGL8 231 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 LCN15Q6UWW0 184 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 CCDC28AQ8IWP9 274 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 LINC00612Q8N6U2 182 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 ARL6Q9H0F7 186 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 ARV1Q9H2C2 271 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 NPVFQ9HCQ7 196 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 SCRT2Q9NQ03 307 aa10.34□□□□□ -0.75
PRKDC-203ENST00000432581 APOBP04114 4563 aaKnown RBP10.33□□□□□ -0.76
PRKDC-203ENST00000432581 PMS2P5A8MQ11 134 aa10.33□□□□□ -0.76
PRKDC-203ENST00000432581 H3BNG1 76 aa10.33□□□□□ -0.76
PRKDC-203ENST00000432581 MRPS12O15235 138 aaKnown RBP10.33□□□□□ -0.76
PRKDC-203ENST00000432581 SMIM8Q96KF7 97 aa10.33□□□□□ -0.76
PRKDC-203ENST00000432581 SLC50A1Q9BRV3 221 aa10.33□□□□□ -0.76
PRKDC-203ENST00000432581 KRTAP1-5Q9BYS1 174 aa10.33□□□□□ -0.76
PRKDC-203ENST00000432581 ZNF331Q9NQX6 463 aaPredicted RBP10.33□□□□□ -0.76
PRKDC-203ENST00000432581 H3BMQ9 156 aa10.32□□□□□ -0.76
PRKDC-203ENST00000432581 ZNF701M0R085 212 aaPredicted RBP10.32□□□□□ -0.76
PRKDC-203ENST00000432581 SSSCA1O60232 199 aa10.32□□□□□ -0.76
PRKDC-203ENST00000432581 RLN2P04090 185 aa10.32□□□□□ -0.76
PRKDC-203ENST00000432581 RRAS2P62070 204 aaPredicted RBP10.32□□□□□ -0.76
PRKDC-203ENST00000432581 TEPPQ6URK8 271 aa10.32□□□□□ -0.76
PRKDC-203ENST00000432581 PATE2Q6UY27 113 aa10.32□□□□□ -0.76
PRKDC-203ENST00000432581 CCDC190Q86UF4 302 aa10.32□□□□□ -0.76
PRKDC-203ENST00000432581 OR10P1Q8NGE3 313 aa10.32□□□□□ -0.76
PRKDC-203ENST00000432581 MGAT4CQ9UBM8 478 aa10.32□□□□□ -0.76
PRKDC-203ENST00000432581 MRPS16Q9Y3D3 137 aaKnown RBP10.32□□□□□ -0.76
PRKDC-203ENST00000432581 A0A0J9YY99 117 aa10.31□□□□□ -0.76
PRKDC-203ENST00000432581 C9orf170A2RU37 121 aa10.31□□□□□ -0.76
PRKDC-203ENST00000432581 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
PRKDC-203ENST00000432581 GFI1BQ5VTD9 330 aa10.31□□□□□ -0.76
PRKDC-203ENST00000432581 TMEM14EPQ6UXP3 125 aa10.31□□□□□ -0.76
PRKDC-203ENST00000432581 LINC00305Q7Z4B0 112 aa10.31□□□□□ -0.76
PRKDC-203ENST00000432581 ZNF546Q86UE3 836 aa10.31□□□□□ -0.76
PRKDC-203ENST00000432581 BPIFA4PQ86YQ2 179 aa10.31□□□□□ -0.76
PRKDC-203ENST00000432581 V9GYH0 126 aa10.31□□□□□ -0.76
PRKDC-203ENST00000432581 GAGE12BA1L429 117 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 GOSR2O14653 212 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 CCNKO75909 580 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 GAGE7O76087 117 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 METTL15P1P0C7V9 234 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 GAGE12FP0CL80 117 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 GAGE12GP0CL81 117 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 GAGE12IP0CL82 117 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 PRB4P10163 310 aaPredicted RBP10.3□□□□□ -0.76
PRKDC-203ENST00000432581 HOXA5P20719 270 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 KRTAP10-2P60368 255 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 SLC38A11Q08AI6 406 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 KIR3DS1Q14943 382 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 ESRGQ1W209 222 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 C4orf46Q504U0 113 aa10.3□□□□□ -0.76
PRKDC-203ENST00000432581 TSC22D2O75157 780 aa10.29□□□□□ -0.76
PRKDC-203ENST00000432581 TAS2R30P59541 319 aa10.29□□□□□ -0.76
PRKDC-203ENST00000432581 PXMP4Q9Y6I8 212 aa10.29□□□□□ -0.76
PRKDC-203ENST00000432581 PRAC2D3DTV9 90 aa10.28□□□□□ -0.76
PRKDC-203ENST00000432581 AGPAT2O15120 278 aa10.28□□□□□ -0.76
PRKDC-203ENST00000432581 COX7A2P2O60397 106 aa10.28□□□□□ -0.76
PRKDC-203ENST00000432581 S100A5P33763 92 aa10.28□□□□□ -0.76
PRKDC-203ENST00000432581 LEPP41159 167 aa10.28□□□□□ -0.76
PRKDC-203ENST00000432581 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
PRKDC-203ENST00000432581 ODF3Q96PU9 254 aa10.28□□□□□ -0.76
PRKDC-203ENST00000432581 PYGO2Q9BRQ0 406 aa10.28□□□□□ -0.76
PRKDC-203ENST00000432581 GGACTQ9BVM4 153 aa10.28□□□□□ -0.76
PRKDC-203ENST00000432581 PARD6GQ9BYG4 376 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms