RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 Q71RC1 249 aaPredicted RBP15.14■□□□□ 0.01
VRK2-205ENST00000432057 KRTAP1-3Q8IUG1 177 aa15.14■□□□□ 0.01
VRK2-205ENST00000432057 TRAPPC1Q9Y5R8 145 aa15.14■□□□□ 0.01
VRK2-205ENST00000432057 M0R3E3 92 aa15.13■□□□□ 0.01
VRK2-205ENST00000432057 FRMD6-AS1P0C7T7 363 aa15.13■□□□□ 0.01
VRK2-205ENST00000432057 PPIFP30405 207 aaKnown RBP15.13■□□□□ 0.01
VRK2-205ENST00000432057 SMAD5-AS1Q9Y6J3 95 aa15.13■□□□□ 0.01
VRK2-205ENST00000432057 SMIM27A0A1W2PRY6 76 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 CLPSL1A2RUU4 121 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 IFITM10A6NMD0 228 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 FSHBP01225 129 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 PRNTQ86SH4 94 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 MBD6Q96DN6 1003 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 HELZ2Q9BYK8 2649 aaKnown RBP15.12■□□□□ 0.01
VRK2-205ENST00000432057 SPINK4O60575 86 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 CBLN1P23435 193 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 CDX1P47902 265 aaPredicted RBP15.12■□□□□ 0.01
VRK2-205ENST00000432057 SLC35B1P78383 322 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 TMEM190Q8WZ59 177 aa15.12■□□□□ 0.01
VRK2-205ENST00000432057 PDZD11Q5EBL8 140 aa15.11■□□□□ 0.01
VRK2-205ENST00000432057 LINC00322Q6ZN03 302 aaPredicted RBP15.11■□□□□ 0.01
VRK2-205ENST00000432057 TMEM75Q8N9X5 138 aa15.11■□□□□ 0.01
VRK2-205ENST00000432057 AAMDCQ9H7C9 122 aa15.11■□□□□ 0.01
VRK2-205ENST00000432057 DIRC3C9JPN6 131 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 S100A7P31151 101 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 IER3P46695 156 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 RELQ04864 619 aaPredicted RBP15.1■□□□□ 0.01
VRK2-205ENST00000432057 TMEM95Q3KNT9 176 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 HIST3H2BBQ8N257 126 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 GRAMD2BQ96HH9 432 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 ASCL2Q99929 193 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 IGHV3-66A0A0C4DH42 116 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 TRBV6-1A0A0K0K1D8 114 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 H3BUA1 57 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 ZNF207O43670 478 aaKnown RBP15.1■□□□□ 0.01
VRK2-205ENST00000432057 S100A8P05109 93 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 PSG9Q00887 426 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 TMEM183AQ8IXX5 376 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 CIARTQ8N365 385 aaPredicted RBP15.1■□□□□ 0.01
VRK2-205ENST00000432057 ATP6V0BQ99437 205 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 ZNF492Q9P255 531 aa15.1■□□□□ 0.01
VRK2-205ENST00000432057 XKRY2A2RUG3 117 aa15.09■□□□□ 0.01
VRK2-205ENST00000432057 BUB3O43684 328 aa15.09■□□□□ 0.01
VRK2-205ENST00000432057 TRBV12-3P01733 135 aa15.09■□□□□ 0.01
VRK2-205ENST00000432057 PF4V1P10720 104 aa15.09■□□□□ 0.01
VRK2-205ENST00000432057 ARL3P36405 182 aa15.09■□□□□ 0.01
VRK2-205ENST00000432057 LCNL1Q6ZST4 164 aa15.09■□□□□ 0.01
VRK2-205ENST00000432057 GPR61Q9BZJ8 451 aa15.09■□□□□ 0.01
VRK2-205ENST00000432057 KLK15Q9H2R5 256 aa15.09■□□□□ 0.01
VRK2-205ENST00000432057 IGHV3OR16-13A0A075B7E8 117 aa15.08■□□□□ 0.01
VRK2-205ENST00000432057 IGHV3-74A0A0B4J1X5 117 aa15.08■□□□□ 0.01
VRK2-205ENST00000432057 K7EQM0 130 aa15.08■□□□□ 0.01
VRK2-205ENST00000432057 BRI3O95415 125 aa15.08■□□□□ 0.01
VRK2-205ENST00000432057 APOHP02749 345 aaPredicted RBP15.08■□□□□ 0.01
VRK2-205ENST00000432057 MEOX2P50222 304 aa15.08■□□□□ 0.01
VRK2-205ENST00000432057 PSG3Q16557 428 aa15.08■□□□□ 0.01
VRK2-205ENST00000432057 C12orf57Q99622 126 aa15.08■□□□□ 0.01
VRK2-205ENST00000432057 TEX15Q9BXT5 2789 aa15.08■□□□□ 0
VRK2-205ENST00000432057 IGHV3-49A0A0A0MS15 119 aa15.08■□□□□ 0
VRK2-205ENST00000432057 C19orf71A6NCJ1 209 aa15.08■□□□□ 0
VRK2-205ENST00000432057 IGHV3-11P01762 117 aa15.08■□□□□ 0
VRK2-205ENST00000432057 MRPL54Q6P161 138 aaKnown RBP15.08■□□□□ 0
VRK2-205ENST00000432057 METTL26Q96S19 204 aa15.08■□□□□ 0
VRK2-205ENST00000432057 MRPL18Q9H0U6 180 aaKnown RBP15.08■□□□□ 0
VRK2-205ENST00000432057 PSG8Q9UQ74 426 aa15.08■□□□□ 0
VRK2-205ENST00000432057 CREBBPQ92793 2442 aa15.07■□□□□ 0
VRK2-205ENST00000432057 IZUMO1RA6ND01 250 aa15.07■□□□□ 0
VRK2-205ENST00000432057 SNURFLB1AK76 121 aa15.07■□□□□ 0
VRK2-205ENST00000432057 IGLV1-40P01703 118 aa15.07■□□□□ 0
VRK2-205ENST00000432057 HLA-DMBP28068 263 aa15.07■□□□□ 0
VRK2-205ENST00000432057 RAB9AP51151 201 aa15.07■□□□□ 0
VRK2-205ENST00000432057 CFHR3Q02985 330 aa15.07■□□□□ 0
VRK2-205ENST00000432057 IGFL4Q6B9Z1 124 aa15.07■□□□□ 0
VRK2-205ENST00000432057 RPP21Q9H633 154 aaKnown RBP15.07■□□□□ 0
VRK2-205ENST00000432057 PRSS57Q6UWY2 283 aa15.06■□□□□ 0
VRK2-205ENST00000432057 USMG5Q96IX5 58 aa15.06■□□□□ 0
VRK2-205ENST00000432057 ITPR3Q14573 2671 aa15.06■□□□□ 0
VRK2-205ENST00000432057 ZNF253O75346 499 aa15.06■□□□□ 0
VRK2-205ENST00000432057 P01737 135 aa15.06■□□□□ 0
VRK2-205ENST00000432057 CSN1S1P47710 185 aa15.06■□□□□ 0
VRK2-205ENST00000432057 C9orf139Q6ZV77 190 aa15.06■□□□□ 0
VRK2-205ENST00000432057 OR5R1Q8NH85 324 aa15.06■□□□□ 0
VRK2-205ENST00000432057 TSKUQ8WUA8 353 aa15.06■□□□□ 0
VRK2-205ENST00000432057 ZC2HC1AQ96GY0 325 aa15.06■□□□□ 0
VRK2-205ENST00000432057 PRSS22Q9GZN4 317 aa15.06■□□□□ 0
VRK2-205ENST00000432057 MXRA5Q9NR99 2828 aa15.05■□□□□ 0
VRK2-205ENST00000432057 IGKV2-40A0A087WW87 121 aaPredicted RBP15.05■□□□□ -0
VRK2-205ENST00000432057 A0A087X0K7 114 aa15.05■□□□□ -0
VRK2-205ENST00000432057 ZNF785A8K8V0 405 aa15.05■□□□□ -0
VRK2-205ENST00000432057 IGKV2D-40P01614 121 aaPredicted RBP15.05■□□□□ -0
VRK2-205ENST00000432057 RPL19P84098 196 aaKnown RBP15.05■□□□□ -0
VRK2-205ENST00000432057 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.05■□□□□ -0
VRK2-205ENST00000432057 GBGT1Q8N5D6 347 aa15.05■□□□□ -0
VRK2-205ENST00000432057 NEU1Q99519 415 aa15.05■□□□□ -0
VRK2-205ENST00000432057 ZNF331Q9NQX6 463 aaPredicted RBP15.05■□□□□ -0
VRK2-205ENST00000432057 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.04■□□□□ -0
VRK2-205ENST00000432057 CHEK1O14757 476 aa15.04■□□□□ -0
VRK2-205ENST00000432057 IGHG4P01861 327 aa15.04■□□□□ -0
VRK2-205ENST00000432057 COA6Q5JTJ3 125 aaKnown RBP15.04■□□□□ -0
VRK2-205ENST00000432057 CYB5R2Q6BCY4 276 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms