RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 IGHV3-33P01772 117 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 PPP1R2P41236 205 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 CAPZBP47756 277 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 SERPINB9P50453 376 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 RPL19P84098 196 aaKnown RBP0.38□□□□□ -2.35
CDC40-204ENST00000431461 KLRD1Q13241 179 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 CHCHD1Q96BP2 118 aaKnown RBP0.38□□□□□ -2.35
CDC40-204ENST00000431461 PSTPIP2Q9H939 334 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 JPT1Q9UK76 154 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 BOKQ9UMX3 212 aaPredicted RBP0.38□□□□□ -2.35
CDC40-204ENST00000431461 FBN2P35556 2912 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 CNTRLQ7Z7A1 2325 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 CAMSAP1Q5T5Y3 1602 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 HECW1Q76N89 1606 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 NISCHQ9Y2I1 1504 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 MIA2Q96PC5 1412 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
CDC40-204ENST00000431461 MYO18AQ92614 2054 aaKnown RBP0.37□□□□□ -2.35
CDC40-204ENST00000431461 E9PCH4 1651 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 PCF11O94913 1555 aaKnown RBP0.37□□□□□ -2.35
CDC40-204ENST00000431461 CST7O76096 145 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 TRGC2P03986 189 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 CD2P06729 351 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 CRHP06850 196 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 RPL35P42766 123 aaKnown RBP0.37□□□□□ -2.35
CDC40-204ENST00000431461 FOXA3P55318 350 aaPredicted RBP0.37□□□□□ -2.35
CDC40-204ENST00000431461 MRPS36P82909 103 aaKnown RBP0.37□□□□□ -2.35
CDC40-204ENST00000431461 FKBP1CQ5VVH2 108 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 PATE2Q6UY27 113 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 PHF5AQ7RTV0 110 aaKnown RBP0.37□□□□□ -2.35
CDC40-204ENST00000431461 POP5Q969H6 163 aaKnown RBP0.37□□□□□ -2.35
CDC40-204ENST00000431461 ISOC1Q96CN7 298 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 OR2H1Q9GZK4 316 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 C10orf95Q9H7T3 257 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 MED12Q93074 2177 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 TRPM1Q7Z4N2 1603 aa0.37□□□□□ -2.35
CDC40-204ENST00000431461 SNRNP200O75643 2136 aaKnown RBP0.37□□□□□ -2.35
CDC40-204ENST00000431461 ALPK3Q96L96 1907 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 NUP98P52948 1817 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 ROCK1Q13464 1354 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 SCN8AQ9UQD0 1980 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 A6NN06 94 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 H3BQV1 296 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 RER1O15258 196 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 KLF7O75840 302 aaPredicted RBP0.36□□□□□ -2.35
CDC40-204ENST00000431461 DEFA3P59666 94 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 GNG5P63218 68 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 SPRNQ5BIV9 151 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 C1orf134Q5TEV5 83 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 C1orf140Q5VVS0 124 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 HACD4Q5VWC8 232 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 C5orf17Q8NAS9 161 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 PLEKHB2Q96CS7 222 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 GINS3Q9BRX5 216 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 CST11Q9H112 138 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 KCPQ6ZWJ8 1503 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 PIK3C2AO00443 1686 aa0.36□□□□□ -2.35
CDC40-204ENST00000431461 A0A0J9YY99 117 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 TRBV30A0A0K0K1B3 111 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 PPYP01298 95 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 TMBIM6P55061 237 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 LSM3P62310 102 aaKnown RBP0.35□□□□□ -2.35
CDC40-204ENST00000431461 HBBP68871 147 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 BASP1P80723 227 aaKnown RBP0.35□□□□□ -2.35
CDC40-204ENST00000431461 EIF3IQ13347 325 aaKnown RBP0.35□□□□□ -2.35
CDC40-204ENST00000431461 RTL8BQ17RB0 113 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 CCSMST1Q4G0I0 132 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 C10orf111Q8N326 155 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 FAM216BQ8N7L0 139 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 OR4B1Q8NGF8 309 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 AP3S1Q92572 193 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 ZC2HC1AQ96GY0 325 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 GPX7Q96SL4 187 aaPredicted RBP0.35□□□□□ -2.35
CDC40-204ENST00000431461 EFCAB11Q9BUY7 163 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 WFDC10AQ9H1F0 79 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 BOLA2Q9H3K6 86 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 BIN3Q9NQY0 253 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 PLAC8Q9NZF1 115 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 SIP14410 1827 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 KIAA1107Q9UPP5 1409 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 FREM3P0C091 2139 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 CEP164Q9UPV0 1460 aa0.35□□□□□ -2.35
CDC40-204ENST00000431461 RTL9Q8NET4 1388 aa0.34□□□□□ -2.35
CDC40-204ENST00000431461 K7EIL1 84 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 PGRMC1O00264 195 aaKnown RBP0.34□□□□□ -2.36
CDC40-204ENST00000431461 IGLV1-51P01701 117 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 CCL4P13236 92 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 ARPP19P56211 112 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 NDUFA6P56556 154 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 CHD3Q12873 2000 aaKnown RBP0.34□□□□□ -2.36
CDC40-204ENST00000431461 Q6ZQY7 126 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 KRTAP19-3Q7Z4W3 81 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 STX19Q8N4C7 294 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 Q8TAT8 98 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 DGCR14Q96DF8 476 aaKnown RBP0.34□□□□□ -2.36
CDC40-204ENST00000431461 AP1S3Q96PC3 154 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 PLXNA4Q9HCM2 1894 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 LAMTOR2Q9Y2Q5 125 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 TPRKBQ9Y3C4 175 aa0.34□□□□□ -2.36
CDC40-204ENST00000431461 NUBP2Q9Y5Y2 271 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms