RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 DLK1P80370 383 aa13□□□□□ -0.33
AC004540.1-202ENST00000430548 PSG3Q16557 428 aa13□□□□□ -0.33
AC004540.1-202ENST00000430548 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
AC004540.1-202ENST00000430548 SMCO3A2RU48 225 aa12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 CCNKO75909 580 aa12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 CDKN1BP46527 198 aa12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 CCL18P55774 89 aa12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 TMEM14EPQ6UXP3 125 aa12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 ZNF493Q6ZR52 646 aa12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 LINC00612Q8N6U2 182 aa12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 LINC01587Q99440 93 aa12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 TIMM8BQ9Y5J9 83 aaPredicted RBP12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 DNAH5Q8TE73 4624 aa12.99□□□□□ -0.33
AC004540.1-202ENST00000430548 C9orf170A2RU37 121 aa12.98□□□□□ -0.33
AC004540.1-202ENST00000430548 OR5G3P0C626 314 aa12.98□□□□□ -0.33
AC004540.1-202ENST00000430548 RHOBP62745 196 aa12.98□□□□□ -0.33
AC004540.1-202ENST00000430548 PATE2Q6UY27 113 aa12.98□□□□□ -0.33
AC004540.1-202ENST00000430548 CCDC190Q86UF4 302 aa12.98□□□□□ -0.33
AC004540.1-202ENST00000430548 SMIM8Q96KF7 97 aa12.98□□□□□ -0.33
AC004540.1-202ENST00000430548 C20orf144Q9BQM9 153 aa12.98□□□□□ -0.33
AC004540.1-202ENST00000430548 PSENENQ9NZ42 101 aa12.98□□□□□ -0.33
AC004540.1-202ENST00000430548 SSSCA1O60232 199 aa12.97□□□□□ -0.33
AC004540.1-202ENST00000430548 LCN15Q6UWW0 184 aa12.97□□□□□ -0.33
AC004540.1-202ENST00000430548 S100A7AQ86SG5 101 aa12.97□□□□□ -0.33
AC004540.1-202ENST00000430548 RPUSD4Q96CM3 377 aaKnown RBP12.97□□□□□ -0.33
AC004540.1-202ENST00000430548 ARV1Q9H2C2 271 aa12.97□□□□□ -0.33
AC004540.1-202ENST00000430548 ZNF331Q9NQX6 463 aaPredicted RBP12.97□□□□□ -0.33
AC004540.1-202ENST00000430548 RNF24Q9Y225 148 aa12.97□□□□□ -0.33
AC004540.1-202ENST00000430548 H7BYZ3 331 aa12.96□□□□□ -0.33
AC004540.1-202ENST00000430548 PXDC1Q5TGL8 231 aa12.96□□□□□ -0.33
AC004540.1-202ENST00000430548 SSX7Q7RTT5 188 aa12.96□□□□□ -0.33
AC004540.1-202ENST00000430548 ZNF503Q96F45 646 aa12.96□□□□□ -0.33
AC004540.1-202ENST00000430548 SLC50A1Q9BRV3 221 aa12.96□□□□□ -0.33
AC004540.1-202ENST00000430548 KRTAP1-5Q9BYS1 174 aa12.96□□□□□ -0.33
AC004540.1-202ENST00000430548 ARL6Q9H0F7 186 aa12.96□□□□□ -0.33
AC004540.1-202ENST00000430548 NPVFQ9HCQ7 196 aa12.96□□□□□ -0.33
AC004540.1-202ENST00000430548 NDUFB6O95139 128 aa12.95□□□□□ -0.34
AC004540.1-202ENST00000430548 RRAS2P62070 204 aaPredicted RBP12.95□□□□□ -0.34
AC004540.1-202ENST00000430548 SLC38A11Q08AI6 406 aa12.95□□□□□ -0.34
AC004540.1-202ENST00000430548 TEPPQ6URK8 271 aa12.95□□□□□ -0.34
AC004540.1-202ENST00000430548 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
AC004540.1-202ENST00000430548 PPP1R14DQ9NXH3 145 aa12.95□□□□□ -0.34
AC004540.1-202ENST00000430548 TSC22D2O75157 780 aa12.94□□□□□ -0.34
AC004540.1-202ENST00000430548 METTL15P1P0C7V9 234 aa12.94□□□□□ -0.34
AC004540.1-202ENST00000430548 C4orf46Q504U0 113 aa12.94□□□□□ -0.34
AC004540.1-202ENST00000430548 ZNF546Q86UE3 836 aa12.94□□□□□ -0.34
AC004540.1-202ENST00000430548 MAPKAPK5-AS1Q8N8E1 139 aa12.94□□□□□ -0.34
AC004540.1-202ENST00000430548 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
AC004540.1-202ENST00000430548 UPK3BQ9BT76 320 aa12.94□□□□□ -0.34
AC004540.1-202ENST00000430548 SRRQ9GZT4 340 aa12.94□□□□□ -0.34
AC004540.1-202ENST00000430548 RCL1Q9Y2P8 373 aaKnown RBP12.94□□□□□ -0.34
AC004540.1-202ENST00000430548 PRB4P10163 310 aaPredicted RBP12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 TAS2R30P59541 319 aa12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 CLINT1Q14677 625 aa12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 KIR3DS1Q14943 382 aa12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 TTC32Q5I0X7 151 aa12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 GFI1BQ5VTD9 330 aa12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 OR10P1Q8NGE3 313 aa12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 LRRC20Q8TCA0 184 aa12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 Q9H3A6 140 aa12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 MGAT4CQ9UBM8 478 aa12.93□□□□□ -0.34
AC004540.1-202ENST00000430548 NAP1L6A6NFF2 107 aa12.92□□□□□ -0.34
AC004540.1-202ENST00000430548 SLC17A3O00476 420 aa12.92□□□□□ -0.34
AC004540.1-202ENST00000430548 OR4E1P0C645 316 aa12.92□□□□□ -0.34
AC004540.1-202ENST00000430548 HTN1P15515 57 aa12.92□□□□□ -0.34
AC004540.1-202ENST00000430548 S100A5P33763 92 aa12.92□□□□□ -0.34
AC004540.1-202ENST00000430548 LINC00305Q7Z4B0 112 aa12.92□□□□□ -0.34
AC004540.1-202ENST00000430548 ZBTB8BQ8NAP8 495 aaPredicted RBP12.92□□□□□ -0.34
AC004540.1-202ENST00000430548 RXFP4Q8TDU9 374 aa12.92□□□□□ -0.34
AC004540.1-202ENST00000430548 Q9H8V8 135 aa12.92□□□□□ -0.34
AC004540.1-202ENST00000430548 TRAV26-1A0A087WT03 109 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 H3BNG1 76 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 ZNF701M0R085 212 aaPredicted RBP12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 AGPAT2O15120 278 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 IGLC2P0DOY2 106 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 M6PRP20645 277 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 HOXA5P20719 270 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 ARL16Q0P5N6 197 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 BPIFA4PQ86YQ2 179 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 GNPNAT1Q96EK6 184 aaPredicted RBP12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 ODF3Q96PU9 254 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 GGACTQ9BVM4 153 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 PARD6GQ9BYG4 376 aaPredicted RBP12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 FLVCR2Q9UPI3 526 aa12.91□□□□□ -0.34
AC004540.1-202ENST00000430548 A0A1W2PPQ1 181 aa12.9□□□□□ -0.34
AC004540.1-202ENST00000430548 PRAC2D3DTV9 90 aa12.9□□□□□ -0.34
AC004540.1-202ENST00000430548 BTCP35070 178 aa12.9□□□□□ -0.34
AC004540.1-202ENST00000430548 MORN5Q5VZ52 161 aa12.9□□□□□ -0.34
AC004540.1-202ENST00000430548 SPATA12Q7Z6I5 190 aa12.9□□□□□ -0.34
AC004540.1-202ENST00000430548 Q8N1X5 172 aa12.9□□□□□ -0.34
AC004540.1-202ENST00000430548 TMEM37Q8WXS4 190 aa12.9□□□□□ -0.34
AC004540.1-202ENST00000430548 MGST2Q99735 147 aa12.9□□□□□ -0.34
AC004540.1-202ENST00000430548 GOSR2O14653 212 aa12.89□□□□□ -0.35
AC004540.1-202ENST00000430548 BTF3P20290 206 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-202ENST00000430548 OPCMLQ14982 345 aa12.89□□□□□ -0.35
AC004540.1-202ENST00000430548 IAH1Q2TAA2 248 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-202ENST00000430548 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
AC004540.1-202ENST00000430548 MRPS16Q9Y3D3 137 aaKnown RBP12.89□□□□□ -0.35
AC004540.1-202ENST00000430548 PXMP4Q9Y6I8 212 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms