RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 RPP21Q9H633 154 aaKnown RBP10.36□□□□□ -0.75
PTCH1-207ENST00000429896 RPL15P61313 204 aaKnown RBP10.36□□□□□ -0.75
PTCH1-207ENST00000429896 CHCHD5Q9BSY4 110 aa10.36□□□□□ -0.75
PTCH1-207ENST00000429896 PRDM13Q9H4Q3 707 aa10.36□□□□□ -0.75
PTCH1-207ENST00000429896 CA1P00915 261 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-207ENST00000429896 CMC4P56277 68 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-207ENST00000429896 HIGD1CA8MV81 97 aa10.35□□□□□ -0.75
PTCH1-207ENST00000429896 IGKV2-40A0A087WW87 121 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-207ENST00000429896 IGKV2D-40P01614 121 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-207ENST00000429896 IGFL4Q6B9Z1 124 aa10.35□□□□□ -0.75
PTCH1-207ENST00000429896 PGPEP1LA6NFU8 196 aa10.35□□□□□ -0.75
PTCH1-207ENST00000429896 DDTP30046 118 aa10.35□□□□□ -0.75
PTCH1-207ENST00000429896 LINC01619G3V211 115 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 CD5P06127 495 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 TRAV5A0A0B4J249 113 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 UBE2E2Q96LR5 201 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 PSCAO43653 123 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 CD5LO43866 347 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 FMC1Q96HJ9 113 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 CYTL1Q9NRR1 136 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 MPDZO75970 2070 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 TMEM250H0YL14 139 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 ATP5LO75964 103 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 CD28P10747 220 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 PAX2Q02962 417 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 VCX2Q9H322 139 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 IGHV4-31P0DP07 118 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 FNDC4Q9H6D8 234 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-207ENST00000429896 IL36BQ9NZH7 164 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 CEP350Q5VT06 3117 aa10.34□□□□□ -0.75
PTCH1-207ENST00000429896 G3V318 75 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 ST20Q9HBF5 79 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 TNRC6BQ9UPQ9 1833 aaKnown RBP10.33□□□□□ -0.76
PTCH1-207ENST00000429896 ADARB2-AS1A8MUL3 147 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 SLC50A1Q9BRV3 221 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 SIGLEC15Q6ZMC9 328 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 USF3Q68DE3 2245 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 A0A1B0GUT8 65 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 LINC00158P58513 81 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 LMO4P61968 165 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 SRSF3P84103 164 aaKnown RBP10.33□□□□□ -0.76
PTCH1-207ENST00000429896 A0A1W2PPI3 338 aa10.33□□□□□ -0.76
PTCH1-207ENST00000429896 ADMP35318 185 aa10.32□□□□□ -0.76
PTCH1-207ENST00000429896 SIRPDQ9H106 197 aa10.32□□□□□ -0.76
PTCH1-207ENST00000429896 SLC25A20O43772 301 aa10.32□□□□□ -0.76
PTCH1-207ENST00000429896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-207ENST00000429896 ZNF688P0C7X2 276 aa10.32□□□□□ -0.76
PTCH1-207ENST00000429896 C1QL4Q86Z23 238 aa10.32□□□□□ -0.76
PTCH1-207ENST00000429896 PHLDA1Q8WV24 401 aaPredicted RBP10.32□□□□□ -0.76
PTCH1-207ENST00000429896 GTF3C1Q12789 2109 aa10.32□□□□□ -0.76
PTCH1-207ENST00000429896 LYL1P12980 280 aa10.32□□□□□ -0.76
PTCH1-207ENST00000429896 PAPPA-AS1Q5QFB9 102 aa10.32□□□□□ -0.76
PTCH1-207ENST00000429896 TRAV8-2A0A0B4J237 113 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 ELANEP08246 267 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 CFHR3Q02985 330 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 TRGV9Q99603 122 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 SEPSECSQ9HD40 501 aaKnown RBP10.31□□□□□ -0.76
PTCH1-207ENST00000429896 HBDP02042 147 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 RNASE2P10153 161 aaKnown RBP10.31□□□□□ -0.76
PTCH1-207ENST00000429896 ACTL10Q5JWF8 245 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 A0A1B0GUS0 222 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 FOXL1Q12952 345 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 Q8N7P7 452 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 GATD1Q8NB37 220 aa10.31□□□□□ -0.76
PTCH1-207ENST00000429896 NPIPB5A8MRT5 1133 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 DUSP14O95147 198 aaKnown RBP10.3□□□□□ -0.76
PTCH1-207ENST00000429896 IGF2RP11717 2491 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 SRP19P09132 144 aaKnown RBP10.3□□□□□ -0.76
PTCH1-207ENST00000429896 SYNJ2BPP57105 145 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 WFDC1Q9HC57 220 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 NDUFA4L2Q9NRX3 87 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 DOCK10Q96BY6 2186 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 PSG1P11464 419 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 TTC9CQ8N5M4 171 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 MCRIP2Q9BUT9 160 aaKnown RBP10.3□□□□□ -0.76
PTCH1-207ENST00000429896 TMEM14BQ9NUH8 114 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 A0A0G2JRQ6 117 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 FSTL3O95633 263 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 NCR2O95944 276 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 IFI27P40305 119 aaPredicted RBP10.3□□□□□ -0.76
PTCH1-207ENST00000429896 S100A7L2Q5SY68 101 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 TREML4Q6UXN2 200 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 CST9LQ9H4G1 147 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 H3BUT2 72 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 NHP2Q9NX24 153 aaKnown RBP10.3□□□□□ -0.76
PTCH1-207ENST00000429896 WDR83OSQ9Y284 106 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 WIPF3A6NGB9 483 aa10.3□□□□□ -0.76
PTCH1-207ENST00000429896 CD300EQ496F6 205 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-207ENST00000429896 TPSG1Q9NRR2 321 aa10.29□□□□□ -0.76
PTCH1-207ENST00000429896 A0A087WWC5 75 aa10.29□□□□□ -0.76
PTCH1-207ENST00000429896 ORMDL3Q8N138 153 aa10.29□□□□□ -0.76
PTCH1-207ENST00000429896 PKDREJQ9NTG1 2253 aa10.29□□□□□ -0.76
PTCH1-207ENST00000429896 OVOL3O00110 214 aa10.29□□□□□ -0.76
PTCH1-207ENST00000429896 NAA38Q9BRA0 125 aaKnown RBP10.29□□□□□ -0.76
PTCH1-207ENST00000429896 ZNF625Q96I27 306 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-207ENST00000429896 DAZ1Q9NQZ3 744 aaKnown RBP10.29□□□□□ -0.76
PTCH1-207ENST00000429896 TRGV1A0A0A0MS02 117 aa10.29□□□□□ -0.76
PTCH1-207ENST00000429896 NDUFB8O95169 186 aa10.29□□□□□ -0.76
PTCH1-207ENST00000429896 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
PTCH1-207ENST00000429896 TOMM40O96008 361 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 347 ms