RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 SH2D7A6NKC9 451 aaPredicted RBP10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 M0QZ24 198 aa10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 SIAH2O43255 324 aa10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 BRI3O95415 125 aa10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 TGFAP01135 160 aa10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 TFPI2P48307 235 aa10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 ZNF672Q499Z4 452 aaPredicted RBP10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 FAM162BQ5T6X4 162 aa10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 SHANK2-AS3Q9BTD1 123 aa10.53□□□□□ -0.72
SNRNP200-202ENST00000429650 ARHGAP32A7KAX9 2087 aa10.52□□□□□ -0.72
SNRNP200-202ENST00000429650 HRNRQ86YZ3 2850 aaPredicted RBP10.52□□□□□ -0.72
SNRNP200-202ENST00000429650 TRAV9-2A0A087WT02 112 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 RNF151Q2KHN1 245 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 SPATA12Q7Z6I5 190 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 SCNM1Q9BWG6 230 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 NCOR2Q9Y618 2525 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 TRBV19A0A075B6N1 114 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 TRBV6-1A0A0K0K1D8 114 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 ZNF785A8K8V0 405 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 H3BRN7 92 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 APOHP02749 345 aaPredicted RBP10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 NBL1P41271 181 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 LY6G5BQ8NDX9 201 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 C17orf77Q96MU5 243 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 LAMTOR2Q9Y2Q5 125 aa10.52□□□□□ -0.73
SNRNP200-202ENST00000429650 SPTBN1Q01082 2364 aaKnown RBP10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 LOC102724200A0A096LPH7 203 aaPredicted RBP10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 OVOL3O00110 214 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 GRNP28799 593 aaKnown RBP10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 BPIFA4PQ86YQ2 179 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 SPTAN1Q13813 2472 aaKnown RBP10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 FAM90A27PA6NNH2 459 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 K7EP13 123 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 HAX1O00165 279 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 CHEK1O14757 476 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 TCF21O43680 179 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 SIGLEC15Q6ZMC9 328 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 STPG4Q8N801 248 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 OR4F17Q8NGA8 305 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 NDFIP1Q9BT67 221 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 TMEM70Q9BUB7 260 aa10.51□□□□□ -0.73
SNRNP200-202ENST00000429650 ANKHD1Q8IWZ3 2542 aaKnown RBP10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 IGHV1-24A0A0C4DH33 117 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 C20orf202A1L168 122 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 K7ENP7 123 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 NBR2O15453 112 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 HTR1DP28221 377 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 TSPOP30536 169 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 PET117Q6UWS5 81 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 ZNF491Q8N8L2 437 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 TMEM75Q8N9X5 138 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 ZC2HC1AQ96GY0 325 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 CACNA1BQ00975 2339 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 HLA-DRB1P01911 266 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 IGLL1P15814 213 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 TMEM190Q8WZ59 177 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 CFHR4Q92496 578 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 RNF125Q96EQ8 232 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 VCX2Q9H322 139 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 DPM3Q9P2X0 92 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 HILPDAQ9Y5L2 63 aa10.5□□□□□ -0.73
SNRNP200-202ENST00000429650 MRPS12O15235 138 aaKnown RBP10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 IL4P05112 153 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 ARF6P62330 175 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 C5orf64Q2M2E5 130 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 OR11H6Q8NGC7 330 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 VPS25Q9BRG1 176 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 CRXO43186 299 aaPredicted RBP10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 LY6HO94772 140 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 NDUFA3O95167 84 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 LINC00173Q6ZV60 143 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 LYPD1Q8N2G4 141 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 ASCL2Q99929 193 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 ZFP30Q9Y2G7 519 aa10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 MRPS16Q9Y3D3 137 aaKnown RBP10.49□□□□□ -0.73
SNRNP200-202ENST00000429650 SAP30O75446 220 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 FOXC1Q12948 553 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 KLF17Q5JT82 389 aaPredicted RBP10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 NPBQ8NG41 125 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 C1RLQ9NZP8 487 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 PSG8Q9UQ74 426 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 WI2-2373I1.2A0A1W2PRP0 233 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 LEPROTL1O95214 131 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 CEACAM3P40198 252 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 FBXL19-AS1Q494R0 122 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 FBLN7Q53RD9 439 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 GLMPQ8WWB7 406 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 ZNF414Q96IQ9 312 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 S4R3C0 116 aa10.48□□□□□ -0.73
SNRNP200-202ENST00000429650 A0A1B0GUT8 65 aa10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 A0A1B0GW15 77 aa10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 SYS1-DBNDD2H3BUS1 97 aa10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 KLRD1Q13241 179 aa10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 PSG3Q16557 428 aa10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 OR4C46A6NHA9 309 aa10.47□□□□□ -0.73
SNRNP200-202ENST00000429650 K7EQM0 130 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms