RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 Q86TA4 180 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 STXBP6Q8NFX7 210 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 C8orf46Q8TAG6 207 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 MEGF9Q9H1U4 602 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 ITGB1BP1O14713 200 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 TIMM23O14925 209 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 SPRY2O43597 315 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 GNG7O60262 68 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 GP9P14770 177 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 ORAOV1Q8WV07 137 aa9.91□□□□□ -0.82
CDH3-202ENST00000429102 IGHV1-69-2A0A0G2JMI3 117 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 FNDC10F2Z333 226 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 ZNF207O43670 478 aaKnown RBP9.9□□□□□ -0.82
CDH3-202ENST00000429102 OR2J3O76001 311 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 EVI2AP22794 236 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 CACNG7P62955 275 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 FAM231DQ6ZW35 169 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 PSG8Q9UQ74 426 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 PPIAL4CA0A0B4J2A2 164 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 IGHV1-3A0A0C4DH29 117 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 C7orf71A4D174 169 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 TOMM40O96008 361 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 HLA-DRB1P01911 266 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 ORM1P02763 201 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 THBDP07204 575 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 PPIAL4GP0DN37 164 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 GRNP28799 593 aaKnown RBP9.9□□□□□ -0.82
CDH3-202ENST00000429102 PSG9Q00887 426 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 TWIST1Q15672 202 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 MTURNQ8N3F0 131 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 MRPS16Q9Y3D3 137 aaKnown RBP9.9□□□□□ -0.82
CDH3-202ENST00000429102 SORL1Q92673 2214 aa9.9□□□□□ -0.82
CDH3-202ENST00000429102 LYZL1Q6UWQ5 148 aa9.9□□□□□ -0.83
CDH3-202ENST00000429102 FMC1Q96HJ9 113 aa9.9□□□□□ -0.83
CDH3-202ENST00000429102 E7EQL1 145 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 FSTL3O95633 263 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 LIPFP07098 398 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 GCSHP23434 173 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 MC5RP33032 325 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 BVES-AS1Q5T3Y7 98 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 CST9LQ9H4G1 147 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 TRAV8-6A0A0B4J262 113 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 A0A1B0GXF2 115 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 VSTM5A8MXK1 200 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 TEX36Q5VZQ5 186 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 C7orf69Q9H7B7 122 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 MSRB1Q9NZV6 116 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 BSNQ9UPA5 3926 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 GAGE12BA1L429 117 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 K7EP13 123 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 IGLC1P0CG04 106 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 GPR183P32249 361 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 MEF2CQ06413 473 aaPredicted RBP9.89□□□□□ -0.83
CDH3-202ENST00000429102 S100A7AQ86SG5 101 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 NGBQ9NPG2 151 aa9.89□□□□□ -0.83
CDH3-202ENST00000429102 TAX1BP3O14907 124 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 LTAP01374 205 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 PRSS1P07477 247 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 MLST8Q9BVC4 326 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 IGKV3-7A0A075B6H7 116 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 IGKV1-17P01599 117 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 RBX1P62877 108 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 ANKRD39Q53RE8 183 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 CENPEQ02224 2701 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 LGALS7P47929 136 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 KLF5Q13887 457 aaPredicted RBP9.88□□□□□ -0.83
CDH3-202ENST00000429102 LCNL1Q6ZST4 164 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 HSPB8Q9UJY1 196 aa9.88□□□□□ -0.83
CDH3-202ENST00000429102 RIGQ13278 110 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 C12orf54Q6X4T0 127 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 THAP8Q8NA92 274 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 FAM57AQ8TBR7 257 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 WIPF2Q8TF74 440 aaPredicted RBP9.87□□□□□ -0.83
CDH3-202ENST00000429102 NEU4Q8WWR8 484 aaPredicted RBP9.87□□□□□ -0.83
CDH3-202ENST00000429102 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 CRYABP02511 175 aaKnown RBP9.87□□□□□ -0.83
CDH3-202ENST00000429102 CKS2P33552 79 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 CSN1S1P47710 185 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 CRIP1P50238 77 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 IGFL2Q6UWQ7 119 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 TRGV9Q99603 122 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 KLK15Q9H2R5 256 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 PPP1R14DQ9NXH3 145 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.87□□□□□ -0.83
CDH3-202ENST00000429102 TMEM189A5PLL7 270 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 K7EQM0 130 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 GATA1P15976 413 aaPredicted RBP9.87□□□□□ -0.83
CDH3-202ENST00000429102 MYCNOSP40205 109 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 TMEM155Q4W5P6 130 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 RNF125Q96EQ8 232 aa9.87□□□□□ -0.83
CDH3-202ENST00000429102 C19orf71A6NCJ1 209 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 FAM231BA6NCW3 169 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 MRGPRG-AS1Q2M3A8 158 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 OCIAD2Q56VL3 154 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 SAPCD1Q5SSQ6 148 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 SMIM15Q7Z3B0 74 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 ATP5L2Q7Z4Y8 100 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 PRELID3AQ96N28 172 aa9.86□□□□□ -0.83
CDH3-202ENST00000429102 SCNM1Q9BWG6 230 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms