RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DEFB130AP0DP74 79 aa12.07□□□□□ -0.48
TRIM39-209ENST00000428728 IL7P13232 177 aa12.07□□□□□ -0.48
TRIM39-209ENST00000428728 ARL16Q0P5N6 197 aa12.07□□□□□ -0.48
TRIM39-209ENST00000428728 PSG3Q16557 428 aa12.07□□□□□ -0.48
TRIM39-209ENST00000428728 ZNF546Q86UE3 836 aa12.07□□□□□ -0.48
TRIM39-209ENST00000428728 C20orf85Q9H1P6 137 aa12.07□□□□□ -0.48
TRIM39-209ENST00000428728 LYRM9A8MSI8 78 aa12.06□□□□□ -0.48
TRIM39-209ENST00000428728 K7EPK0 472 aa12.06□□□□□ -0.48
TRIM39-209ENST00000428728 MBPP02686 304 aaPredicted RBP12.06□□□□□ -0.48
TRIM39-209ENST00000428728 HTN1P15515 57 aa12.06□□□□□ -0.48
TRIM39-209ENST00000428728 AZU1P20160 251 aa12.06□□□□□ -0.48
TRIM39-209ENST00000428728 TAS2R30P59541 319 aa12.06□□□□□ -0.48
TRIM39-209ENST00000428728 B2MP61769 119 aa12.06□□□□□ -0.48
TRIM39-209ENST00000428728 FCN2Q15485 313 aa12.06□□□□□ -0.48
TRIM39-209ENST00000428728 MITD1Q8WV92 249 aa12.06□□□□□ -0.48
TRIM39-209ENST00000428728 RPUSD4Q96CM3 377 aaKnown RBP12.06□□□□□ -0.48
TRIM39-209ENST00000428728 C7orf66A4D0T2 115 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 AGPAT2O15120 278 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 MRPS12O15235 138 aaKnown RBP12.05□□□□□ -0.48
TRIM39-209ENST00000428728 TSPOP30536 169 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 RNF212Q495C1 297 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 LCN15Q6UWW0 184 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 Q6ZR54 194 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 LINC00305Q7Z4B0 112 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 C15orf53Q8NAA6 179 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 LINC01587Q99440 93 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 MGST2Q99735 147 aa12.05□□□□□ -0.48
TRIM39-209ENST00000428728 LSM5Q9Y4Y9 91 aaKnown RBP12.05□□□□□ -0.48
TRIM39-209ENST00000428728 PLAC8L1A1L4L8 177 aa12.04□□□□□ -0.48
TRIM39-209ENST00000428728 H3BTX0 84 aa12.04□□□□□ -0.48
TRIM39-209ENST00000428728 L7N2F9 121 aa12.04□□□□□ -0.48
TRIM39-209ENST00000428728 COX7A2P2O60397 106 aa12.04□□□□□ -0.48
TRIM39-209ENST00000428728 VAMP2P63027 116 aa12.04□□□□□ -0.48
TRIM39-209ENST00000428728 ZNF846Q147U1 533 aa12.04□□□□□ -0.48
TRIM39-209ENST00000428728 PXDC1Q5TGL8 231 aa12.04□□□□□ -0.48
TRIM39-209ENST00000428728 TMEM256Q8N2U0 113 aa12.04□□□□□ -0.48
TRIM39-209ENST00000428728 RNF24Q9Y225 148 aa12.04□□□□□ -0.48
TRIM39-209ENST00000428728 FAM25EA8MYX2 175 aa12.03□□□□□ -0.48
TRIM39-209ENST00000428728 F5H768 121 aa12.03□□□□□ -0.48
TRIM39-209ENST00000428728 SLC17A3O00476 420 aa12.03□□□□□ -0.48
TRIM39-209ENST00000428728 CXCL2P19875 107 aa12.03□□□□□ -0.48
TRIM39-209ENST00000428728 MORN5Q5VZ52 161 aa12.03□□□□□ -0.48
TRIM39-209ENST00000428728 SLC50A1Q9BRV3 221 aa12.03□□□□□ -0.48
TRIM39-209ENST00000428728 ATG101Q9BSB4 218 aa12.03□□□□□ -0.48
TRIM39-209ENST00000428728 ZNF331Q9NQX6 463 aaPredicted RBP12.03□□□□□ -0.48
TRIM39-209ENST00000428728 FAT2Q9NYQ8 4349 aa12.03□□□□□ -0.48
TRIM39-209ENST00000428728 TRAV6A0A075B6T7 132 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 PLA2G10O15496 165 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 LYRM1O43325 122 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 CDKN1BP46527 198 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 BCAP31P51572 246 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 TAS2R60P59551 318 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 OPCMLQ14982 345 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 CNPY1Q3B7I2 92 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 C10orf113Q5VZT2 155 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 BPIFA4PQ86YQ2 179 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 C16orf74Q96GX8 76 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 SEC22CQ9BRL7 303 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 GGACTQ9BVM4 153 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 PARD6GQ9BYG4 376 aaPredicted RBP12.02□□□□□ -0.49
TRIM39-209ENST00000428728 HERC2O95714 4834 aa12.02□□□□□ -0.49
TRIM39-209ENST00000428728 CST7O76096 145 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 NUDT3O95989 172 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 ATP5G1P05496 136 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 ATP5G3P48201 142 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 CAV2P51636 162 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 KIR3DS1Q14943 382 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 SOHLH1Q5JUK2 328 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 TMEM37Q8WXS4 190 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 DNAH2Q9P225 4427 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 MUC4Q99102 2169 aa12.01□□□□□ -0.49
TRIM39-209ENST00000428728 C5orf51A6NDU8 294 aa12□□□□□ -0.49
TRIM39-209ENST00000428728 PRAC2D3DTV9 90 aa12□□□□□ -0.49
TRIM39-209ENST00000428728 CAMLGP49069 296 aa12□□□□□ -0.49
TRIM39-209ENST00000428728 C1orf134Q5TEV5 83 aa12□□□□□ -0.49
TRIM39-209ENST00000428728 MIC13Q5XKP0 118 aa12□□□□□ -0.49
TRIM39-209ENST00000428728 OR10J6PQ8NGY7 276 aa12□□□□□ -0.49
TRIM39-209ENST00000428728 NUDT15Q9NV35 164 aa12□□□□□ -0.49
TRIM39-209ENST00000428728 J3KRW8 73 aa11.99□□□□□ -0.49
TRIM39-209ENST00000428728 TCRBP04435 133 aa11.99□□□□□ -0.49
TRIM39-209ENST00000428728 NRARPQ7Z6K4 114 aa11.99□□□□□ -0.49
TRIM39-209ENST00000428728 RNASE8Q8TDE3 154 aaKnown RBP11.99□□□□□ -0.49
TRIM39-209ENST00000428728 ZNF431Q8TF32 576 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-209ENST00000428728 TMEM263Q8WUH6 116 aaKnown RBP11.99□□□□□ -0.49
TRIM39-209ENST00000428728 NOP10Q9NPE3 64 aaKnown RBP11.99□□□□□ -0.49
TRIM39-209ENST00000428728 TIMM8BQ9Y5J9 83 aaPredicted RBP11.99□□□□□ -0.49
TRIM39-209ENST00000428728 PKHD1P08F94 4074 aa11.99□□□□□ -0.49
TRIM39-209ENST00000428728 UBE2L5PA0A1B0GUS4 154 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 FAM24AA6NFZ4 105 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 H3BQ15 152 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 H7BYZ3 331 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 IGLC2P0DOY2 106 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 MED14OSP0DP75 135 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 S100A10P60903 97 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 RAB31Q13636 194 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 GFI1BQ5VTD9 330 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 UQCC1Q9NVA1 299 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 PXMP4Q9Y6I8 212 aa11.98□□□□□ -0.49
TRIM39-209ENST00000428728 TRAV5A0A0B4J249 113 aa11.97□□□□□ -0.49
TRIM39-209ENST00000428728 CBY3A6NI87 242 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms