RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 ZNF329Q86UD4 541 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 TTC9CQ8N5M4 171 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 LINC00482Q8N8I6 264 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 FAM210BQ96KR6 192 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 OR5B12Q96R08 314 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 HSPB9Q9BQS6 159 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 SLC25A2Q9BXI2 301 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 SRD5A3Q9H8P0 318 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 LINC00527Q9UJ94 153 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 DMRT1Q9Y5R6 373 aa6.67□□□□□ -1.34
HDAC1-202ENST00000428704 TSSC4Q9Y5U2 329 aaPredicted RBP6.67□□□□□ -1.34
HDAC1-202ENST00000428704 TNCP24821 2201 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 TRBV20OR9-2A0A075B6H5 130 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 TRAV9-1A0A075B6T8 112 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 TRAV30A0A087WSZ9 112 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 TGIF2-C20orf24A0A0A6YYL0 155 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 NCBP2LA6PVI3 153 aaKnown RBP6.66□□□□□ -1.34
HDAC1-202ENST00000428704 PAX4O43316 350 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 COX7A2P2O60397 106 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 GGCTO75223 188 aaKnown RBP6.66□□□□□ -1.34
HDAC1-202ENST00000428704 S100A6P06703 90 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 FABP1P07148 127 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 IGLC1P0CG04 106 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 GALR1P47211 349 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 TAS2R60P59551 318 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 CFHR3Q02985 330 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 ZNF90Q03938 601 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 FXYD3Q14802 87 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 PLGLAQ15195 96 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 KHDC1LQ5JSQ8 128 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 C18orf65Q6ZTR6 163 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 OR4X2Q8NGF9 303 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 C2CD4CQ8TF44 421 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 PRR25Q96S07 402 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 OR51M1Q9H341 326 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 DNAH10Q8IVF4 4471 aa6.66□□□□□ -1.34
HDAC1-202ENST00000428704 HECTD4Q9Y4D8 3996 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 HELTA6NFD8 242 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 K7EIM0 57 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 AP4M1O00189 453 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 PHOX2AO14813 284 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 OR7C2O60412 319 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 CNIH1O95406 144 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 REG1AP05451 166 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 OR10J4P0C629 311 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 FCGR2BP31994 310 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-202ENST00000428704 MYCNOSP40205 109 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 SNRPEP62304 92 aaKnown RBP6.65□□□□□ -1.34
HDAC1-202ENST00000428704 CX3CL1P78423 397 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 KCNIP4Q6PIL6 250 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 SBSPONQ8IVN8 264 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 ZFP82Q8N141 532 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 OCC1Q8TAD7 63 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 TMEM68Q96MH6 324 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 PAXXQ9BUH6 204 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 SAV1Q9H4B6 383 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-202ENST00000428704 ZMAT4Q9H898 229 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 ZNF355PQ9NSJ1 428 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 AP5S1Q9NUS5 200 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 TMEM14CQ9P0S9 112 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.65□□□□□ -1.34
HDAC1-202ENST00000428704 URGCP-MRPS24S4R325 110 aa6.65□□□□□ -1.34
HDAC1-202ENST00000428704 IGLV11-55A0A075B6I3 123 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 HYPMO75409 117 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 HLA-DRB1P01911 266 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 S100A8P05109 93 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 HOXA5P20719 270 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 RPL35P42766 123 aaKnown RBP6.64□□□□□ -1.35
HDAC1-202ENST00000428704 FAM3BP58499 235 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-202ENST00000428704 YPEL3P61236 119 aaPredicted RBP6.64□□□□□ -1.35
HDAC1-202ENST00000428704 SUMO1P63165 101 aaKnown RBP6.64□□□□□ -1.35
HDAC1-202ENST00000428704 NDPQ00604 133 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 ASPHD1Q5U4P2 390 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 MORN5Q5VZ52 161 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 TEX38Q6PEX7 206 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 LCNL1Q6ZST4 164 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 LINC00305Q7Z4B0 112 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 LINC00518Q8N0U6 118 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 RNF152Q8N8N0 203 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 OR10G8Q8NGN5 311 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 FXYD5Q96DB9 178 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 SMIM12Q96EX1 92 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 SFRP2Q96HF1 295 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 TXN2Q99757 166 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 RASL11BQ9BPW5 248 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 DERL1Q9BUN8 251 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 THYN1Q9P016 225 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 MRPL27Q9P0M9 148 aaKnown RBP6.64□□□□□ -1.35
HDAC1-202ENST00000428704 ZNF580Q9UK33 172 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 RNF24Q9Y225 148 aa6.64□□□□□ -1.35
HDAC1-202ENST00000428704 IGHV7-81A0A0B4J1V7 117 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 TRAV5A0A0B4J249 113 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 GGTLC3B5MD39 225 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 PPP5D1E7EU14 171 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 TOMM40O96008 361 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 GCGP01275 180 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 IGKV1-17P01599 117 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 TRGC2P03986 189 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 IGF1P05019 195 aa6.63□□□□□ -1.35
HDAC1-202ENST00000428704 S100A9P06702 114 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms