RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 C17orf77Q96MU5 243 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 TMEM160Q9NX00 188 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 URGCP-MRPS24S4R325 110 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 ISLRO14498 428 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 GGCTO75223 188 aaKnown RBP11.09□□□□□ -0.63
CDK3-201ENST00000425876 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 GALR1P47211 349 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 MEOX2P50222 304 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
CDK3-201ENST00000425876 UBE2G1P62253 170 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 BAGE2Q86Y30 109 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 EXOC3-AS1Q8N2X6 119 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 RNF152Q8N8N0 203 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 MYOZ3Q8TDC0 251 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 PYGO2Q9BRQ0 406 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 AAMDCQ9H7C9 122 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 YAE1D1Q9NRH1 226 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 OSTCQ9NRP0 149 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 SMAD5-AS1Q9Y6J3 95 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 SLC17A3O00476 420 aa11.08□□□□□ -0.64
CDK3-201ENST00000425876 IGHV3-11P01762 117 aa11.08□□□□□ -0.64
CDK3-201ENST00000425876 C1QL4Q86Z23 238 aa11.08□□□□□ -0.64
CDK3-201ENST00000425876 PEF1Q9UBV8 284 aaKnown RBP11.08□□□□□ -0.64
CDK3-201ENST00000425876 MTORP42345 2549 aa11.08□□□□□ -0.64
CDK3-201ENST00000425876 IGHV3OR16-8A0A075B7F1 116 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 TRAV34A0A0B4J273 112 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 SERTM2A0A1B0GWG4 89 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 CXCL1P09341 107 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 FOXL1Q12952 345 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 KCNIP4Q6PIL6 250 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 BTF3L4Q96K17 158 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 MLXQ9UH92 298 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 C1orf196B1AJZ1 125 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 K7EQM0 130 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 LTAP01374 205 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 LCNL1Q6ZST4 164 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 FAM210BQ96KR6 192 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 MLST8Q9BVC4 326 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 CSN1S1P47710 185 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 FLI1Q01543 452 aaPredicted RBP11.06□□□□□ -0.64
CDK3-201ENST00000425876 OR5I1Q13606 314 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 TMEM75Q8N9X5 138 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 SMR3AQ99954 134 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 BIN3Q9NQY0 253 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 SERTAD4Q9NUC0 356 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 SONP18583 2426 aaKnown RBP11.05□□□□□ -0.64
CDK3-201ENST00000425876 TRAV9-1A0A075B6T8 112 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 DNAJC9-AS1A6NH13 148 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 ZNF785A8K8V0 405 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 DIRC3C9JPN6 131 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 K7EMT4 169 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 MGST1P10620 155 aaKnown RBP11.05□□□□□ -0.64
CDK3-201ENST00000425876 RAB5BP61020 215 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 GOLT1AQ6ZVE7 132 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 GPHB5Q86YW7 130 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 UBE2E2Q96LR5 201 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 SLC50A1Q9BRV3 221 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 ZNF331Q9NQX6 463 aaPredicted RBP11.05□□□□□ -0.64
CDK3-201ENST00000425876 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 V9GYV3 84 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 ACANP16112 2415 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 A0A1W2PS18 150 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 FBLL1A6NHQ2 334 aaKnown RBP11.04□□□□□ -0.64
CDK3-201ENST00000425876 IGLV2-11P01706 119 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 APOHP02749 345 aaPredicted RBP11.04□□□□□ -0.64
CDK3-201ENST00000425876 RPS10P46783 165 aaKnown RBP11.04□□□□□ -0.64
CDK3-201ENST00000425876 FAM106AQ4KMX7 169 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 C10orf99Q6UWK7 81 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 Q86TA4 180 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 GLMPQ8WWB7 406 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 DUX5Q96PT3 197 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 CLEC5AQ9NY25 188 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 ZFP30Q9Y2G7 519 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 ZNF207O43670 478 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 TYMSP04818 313 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 RPLP1P05386 114 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 LGALS1P09382 135 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 RIPPLY3P57055 190 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 PSG3Q16557 428 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 IBA57Q5T440 356 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 TMEM183AQ8IXX5 376 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 GRAMD2BQ96HH9 432 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 SRD5A3Q9H8P0 318 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 C2CD3Q4AC94 2353 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 LOC105371267A0A1B0GV96 52 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 M0R3E3 92 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 MRPL53Q96EL3 112 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 ZNF492Q9P255 531 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 IGHV3-66A0A0C4DH42 116 aa11.02□□□□□ -0.65
CDK3-201ENST00000425876 A0A1W2PPQ1 181 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms