RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 C17orf77Q96MU5 243 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 TMEM160Q9NX00 188 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 URGCP-MRPS24S4R325 110 aa11.1□□□□□ -0.63
CDK3-201ENST00000425876 ISLRO14498 428 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 GGCTO75223 188 aaKnown RBP11.09□□□□□ -0.63
CDK3-201ENST00000425876 TRBV12-3P01733 135 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 GALR1P47211 349 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 MEOX2P50222 304 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
CDK3-201ENST00000425876 UBE2G1P62253 170 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 SCGB2A2Q13296 93 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 BAGE2Q86Y30 109 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 EXOC3-AS1Q8N2X6 119 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 RNF152Q8N8N0 203 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 MYOZ3Q8TDC0 251 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 PYGO2Q9BRQ0 406 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 AAMDCQ9H7C9 122 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 YAE1D1Q9NRH1 226 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 OSTCQ9NRP0 149 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 SMAD5-AS1Q9Y6J3 95 aa11.09□□□□□ -0.63
CDK3-201ENST00000425876 SLC17A3O00476 420 aa11.08□□□□□ -0.64
CDK3-201ENST00000425876 IGHV3-11P01762 117 aa11.08□□□□□ -0.64
CDK3-201ENST00000425876 C1QL4Q86Z23 238 aa11.08□□□□□ -0.64
CDK3-201ENST00000425876 PEF1Q9UBV8 284 aaKnown RBP11.08□□□□□ -0.64
CDK3-201ENST00000425876 MTORP42345 2549 aa11.08□□□□□ -0.64
CDK3-201ENST00000425876 IGHV3OR16-8A0A075B7F1 116 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 TRAV34A0A0B4J273 112 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 SERTM2A0A1B0GWG4 89 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 CXCL1P09341 107 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 FOXL1Q12952 345 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 KCNIP4Q6PIL6 250 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 BTF3L4Q96K17 158 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 MLXQ9UH92 298 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 TGIF2-C20orf24A0A0A6YYL0 155 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 C1orf196B1AJZ1 125 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 K7EQM0 130 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 LTAP01374 205 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 LCNL1Q6ZST4 164 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 FAM210BQ96KR6 192 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 MLST8Q9BVC4 326 aa11.07□□□□□ -0.64
CDK3-201ENST00000425876 CSN1S1P47710 185 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 FLI1Q01543 452 aaPredicted RBP11.06□□□□□ -0.64
CDK3-201ENST00000425876 OR5I1Q13606 314 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 C16orf54Q6UWD8 224 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 TMEM75Q8N9X5 138 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 SMR3AQ99954 134 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 BIN3Q9NQY0 253 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 SERTAD4Q9NUC0 356 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
CDK3-201ENST00000425876 SONP18583 2426 aaKnown RBP11.05□□□□□ -0.64
CDK3-201ENST00000425876 TRAV9-1A0A075B6T8 112 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 DNAJC9-AS1A6NH13 148 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 ZNF785A8K8V0 405 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 DIRC3C9JPN6 131 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 K7EMT4 169 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 MGST1P10620 155 aaKnown RBP11.05□□□□□ -0.64
CDK3-201ENST00000425876 RAB5BP61020 215 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 UNQ9165/PRO28630Q6UXU0 137 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 GOLT1AQ6ZVE7 132 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 GPHB5Q86YW7 130 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 UBE2E2Q96LR5 201 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 SLC50A1Q9BRV3 221 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 ZNF331Q9NQX6 463 aaPredicted RBP11.05□□□□□ -0.64
CDK3-201ENST00000425876 IL36BQ9NZH7 164 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 V9GYV3 84 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 ACANP16112 2415 aa11.05□□□□□ -0.64
CDK3-201ENST00000425876 A0A1W2PS18 150 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 FBLL1A6NHQ2 334 aaKnown RBP11.04□□□□□ -0.64
CDK3-201ENST00000425876 IGLV2-11P01706 119 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 APOHP02749 345 aaPredicted RBP11.04□□□□□ -0.64
CDK3-201ENST00000425876 RPS10P46783 165 aaKnown RBP11.04□□□□□ -0.64
CDK3-201ENST00000425876 FAM106AQ4KMX7 169 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 C10orf99Q6UWK7 81 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 Q86TA4 180 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 GLMPQ8WWB7 406 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 DUX5Q96PT3 197 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 CLEC5AQ9NY25 188 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 ZFP30Q9Y2G7 519 aa11.04□□□□□ -0.64
CDK3-201ENST00000425876 ZNF207O43670 478 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 TYMSP04818 313 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 RPLP1P05386 114 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 LGALS1P09382 135 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 RIPPLY3P57055 190 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 PSG3Q16557 428 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 IBA57Q5T440 356 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 TMEM183AQ8IXX5 376 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 GRAMD2BQ96HH9 432 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 SRD5A3Q9H8P0 318 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 C2CD3Q4AC94 2353 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 LOC105371267A0A1B0GV96 52 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 M0R3E3 92 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 MRPL53Q96EL3 112 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
CDK3-201ENST00000425876 ZNF492Q9P255 531 aa11.03□□□□□ -0.64
CDK3-201ENST00000425876 IGHV3-66A0A0C4DH42 116 aa11.02□□□□□ -0.65
CDK3-201ENST00000425876 A0A1W2PPQ1 181 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms