RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 DERL1Q9BUN8 251 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 BIN3Q9NQY0 253 aa12.05□□□□□ -0.48
SHOX2-202ENST00000425436 TRBV7-1A0A0A6YYK4 115 aa12.04□□□□□ -0.48
SHOX2-202ENST00000425436 PFN1P07737 140 aaKnown RBP12.04□□□□□ -0.48
SHOX2-202ENST00000425436 GP9P14770 177 aa12.04□□□□□ -0.48
SHOX2-202ENST00000425436 MYCNOSP40205 109 aa12.04□□□□□ -0.48
SHOX2-202ENST00000425436 RPS10P46783 165 aaKnown RBP12.04□□□□□ -0.48
SHOX2-202ENST00000425436 GALR1P47211 349 aa12.04□□□□□ -0.48
SHOX2-202ENST00000425436 CNN1P51911 297 aaKnown RBP12.04□□□□□ -0.48
SHOX2-202ENST00000425436 NDUFA11Q86Y39 141 aa12.04□□□□□ -0.48
SHOX2-202ENST00000425436 OCC1Q8TAD7 63 aa12.04□□□□□ -0.48
SHOX2-202ENST00000425436 ELOVL1Q9BW60 279 aa12.04□□□□□ -0.48
SHOX2-202ENST00000425436 URGCP-MRPS24S4R325 110 aa12.04□□□□□ -0.48
SHOX2-202ENST00000425436 H3BRN7 92 aa12.03□□□□□ -0.48
SHOX2-202ENST00000425436 IL4P05112 153 aa12.03□□□□□ -0.48
SHOX2-202ENST00000425436 LYPD1Q8N2G4 141 aa12.03□□□□□ -0.48
SHOX2-202ENST00000425436 KLHL30-AS1Q8NEE0 82 aa12.03□□□□□ -0.48
SHOX2-202ENST00000425436 OR4F17Q8NGA8 305 aa12.03□□□□□ -0.48
SHOX2-202ENST00000425436 EEF1AKMT3Q96AZ1 226 aa12.03□□□□□ -0.48
SHOX2-202ENST00000425436 PYGO2Q9BRQ0 406 aa12.03□□□□□ -0.48
SHOX2-202ENST00000425436 TRBV20OR9-2A0A075B6H5 130 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 FAM223BA6NKX1 122 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 H3BUA1 57 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 IGHV3-11P01762 117 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 RHOGP84095 191 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 C15orf32Q32M92 178 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 ZNF600Q6ZNG1 722 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 C8orf86Q6ZUL3 223 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 FAM223AQ8IWN6 122 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 OR10G8Q8NGN5 311 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 ZNF502Q8TBZ5 544 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 MYOZ3Q8TDC0 251 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 SMIM12Q96EX1 92 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 GNB4Q9HAV0 340 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 EPDR1Q9UM22 224 aa12.02□□□□□ -0.48
SHOX2-202ENST00000425436 TGIF2-C20orf24A0A0A6YYL0 155 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 PGPA6NDG6 321 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 F8W735 103 aaPredicted RBP12.01□□□□□ -0.49
SHOX2-202ENST00000425436 PEX7O00628 323 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 S100A6P06703 90 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 CTSGP08311 255 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 CXCL1P09341 107 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 CDX1P47902 265 aaPredicted RBP12.01□□□□□ -0.49
SHOX2-202ENST00000425436 RANP62826 216 aaKnown RBP12.01□□□□□ -0.49
SHOX2-202ENST00000425436 DEFB136Q30KP8 78 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 C5orf17Q8NAS9 161 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 UBE2E2Q96LR5 201 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 DUX3Q96PT4 197 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 OTORQ9NRC9 128 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 PKD1L1Q8TDX9 2849 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 TRAV9-1A0A075B6T8 112 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 BMPR1BO00238 502 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 ATP5G2Q06055 141 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 CENPWQ5EE01 88 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 BLNKQ8WV28 456 aa12.01□□□□□ -0.49
SHOX2-202ENST00000425436 OR2T8A6NH00 312 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 ZNF98A6NK75 572 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 M0QZ24 198 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 GGCTO75223 188 aaKnown RBP12□□□□□ -0.49
SHOX2-202ENST00000425436 GCGP01275 180 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 SLC25A5P05141 298 aaKnown RBP12□□□□□ -0.49
SHOX2-202ENST00000425436 RPL19P84098 196 aaKnown RBP12□□□□□ -0.49
SHOX2-202ENST00000425436 PDE6HQ13956 83 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 TMEM183BQ1AE95 376 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 ATG101Q9BSB4 218 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 SRD5A3Q9H8P0 318 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 RABAC1Q9UI14 185 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 KLF12Q9Y4X4 402 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 S4R3C0 116 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 WNK1Q9H4A3 2382 aa12□□□□□ -0.49
SHOX2-202ENST00000425436 PPP5D1E7EU14 171 aa11.99□□□□□ -0.49
SHOX2-202ENST00000425436 ISLRO14498 428 aa11.99□□□□□ -0.49
SHOX2-202ENST00000425436 RPL7P18124 248 aaKnown RBP11.99□□□□□ -0.49
SHOX2-202ENST00000425436 RELQ04864 619 aaPredicted RBP11.99□□□□□ -0.49
SHOX2-202ENST00000425436 USMG5Q96IX5 58 aa11.99□□□□□ -0.49
SHOX2-202ENST00000425436 Q9H3A6 140 aa11.99□□□□□ -0.49
SHOX2-202ENST00000425436 OSTCQ9NRP0 149 aa11.99□□□□□ -0.49
SHOX2-202ENST00000425436 A0A0G2JLM5 398 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 IGHV3-23P01764 117 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 TYMSP04818 313 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 CLEC3BP05452 202 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 FAM3BP58499 235 aaPredicted RBP11.98□□□□□ -0.49
SHOX2-202ENST00000425436 ERVFC1-1P60608 527 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 UBE2G1P62253 170 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 ARL6IP6Q8N6S5 226 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 CMTM2Q8TAZ6 248 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 C4orf3Q8WVX3 66 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 FMC1Q96HJ9 113 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 IGF2BP2-AS1Q96M15 143 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 CHRDL1Q9BU40 450 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 CMYA5Q8N3K9 4069 aa11.98□□□□□ -0.49
SHOX2-202ENST00000425436 TRBV19A0A075B6N1 114 aa11.97□□□□□ -0.49
SHOX2-202ENST00000425436 USF2Q15853 346 aaPredicted RBP11.97□□□□□ -0.49
SHOX2-202ENST00000425436 LEMD1Q68G75 181 aa11.97□□□□□ -0.49
SHOX2-202ENST00000425436 BAGE2Q86Y30 109 aa11.97□□□□□ -0.49
SHOX2-202ENST00000425436 RAX2Q96IS3 184 aa11.97□□□□□ -0.49
SHOX2-202ENST00000425436 ZNF586Q9NXT0 402 aa11.97□□□□□ -0.49
SHOX2-202ENST00000425436 PGPEP1LA6NFU8 196 aa11.96□□□□□ -0.49
SHOX2-202ENST00000425436 K7EN84 100 aa11.96□□□□□ -0.49
SHOX2-202ENST00000425436 K7EQM0 130 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms